RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 NXPE3Q969Y0 559 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 ACAT2Q9BWD1 397 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SLC25A51Q9H1U9 297 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 OR2AG1Q9H205 316 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 EXO5Q9H790 373 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SORCS3Q9UPU3 1222 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 MYH8P13535 1937 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 MGAT4DA6NG13 374 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 PRLRP16471 622 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 DUSP3P51452 185 aaPredicted RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 STX3Q13277 289 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 BMPR2Q13873 1038 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 MBTPS1Q14703 1052 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CA9Q16790 459 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 TMEM220Q6QAJ8 160 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 REXO1L1PQ8IX06 675 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 KIRREL3Q8IZU9 778 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 KBTBD7Q8WVZ9 684 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 LCN9Q8WX39 176 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 ATL1Q8WXF7 558 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 MARCH5Q9NX47 278 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 STON1Q9Y6Q2 735 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CD3EAPO15446 510 aaKnown RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 GALK1P51570 392 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 CDK16Q00536 496 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 ILF2Q12905 390 aaKnown RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 EFTUD2Q15029 972 aaKnown RBP eCLIP9.48□□□□□ -0.89
NEK1-203ENST00000507142 TOMM20Q15388 145 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SLC36A4Q6YBV0 504 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 TMEM173Q86WV6 379 aaPredicted RBP9.48□□□□□ -0.89
NEK1-203ENST00000507142 FAM129CQ86XR2 697 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SH2D3CQ8N5H7 860 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 MAGED4Q96JG8 741 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SLC46A2Q9BY10 475 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SLC2A11Q9BYW1 496 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 NMRAL1Q9HBL8 299 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 SIX2Q9NPC8 291 aa9.48□□□□□ -0.89
NEK1-203ENST00000507142 UPK3BL1B0FP48 263 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 UPK3BL2E5RIL1 263 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 SPECC1L-ADORA2AF8WAN1 911 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 CNTN5O94779 1100 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 PRAMEF1O95521 474 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 CD48P09326 243 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 PECAM1P16284 738 aaPredicted RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 RPL22P35268 128 aaKnown RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 HNF4AP41235 474 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 ABCG1P45844 678 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 PAGE2BQ5JRK9 111 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 FBXO39Q8N4B4 442 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 SPATA22Q8NHS9 363 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 REPS1Q96D71 796 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 RRAGDQ9NQL2 400 aaPredicted RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 DCTN4Q9UJW0 460 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 ACP5P13686 325 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 PFKLP17858 780 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 GP5P40197 560 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 STK19P49842 368 aaPredicted RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 GRTP1Q5TC63 336 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 RALGPS2Q86X27 583 aaPredicted RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 PLD5Q8N7P1 536 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 ASZ1Q8WWH4 475 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 GSDMCQ9BYG8 508 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 NPC1O15118 1278 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 LINC01565O15544 149 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 LAMP2P13473 410 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 CYP20A1Q6UW02 462 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 C11orf74Q86VG3 221 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 GPSM1Q86YR5 675 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 WDR48Q8TAF3 677 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 CCDC126Q96EE4 140 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 PHF21BQ96EK2 531 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 FAM95CA0A1B0GW59 222 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 TARSL2A2RTX5 802 aaKnown RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 C16orf96A6NNT2 1141 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 EIF3HO15372 352 aaKnown RBP eCLIP9.47□□□□□ -0.89
NEK1-203ENST00000507142 PPFIA2O75334 1257 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 DSC1Q08554 894 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 GALNTL6Q49A17 601 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 OLFML1Q6UWY5 402 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 C15orf39Q6ZRI6 1047 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 ERN2Q76MJ5 926 aaKnown RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 MCCC1Q96RQ3 725 aaPredicted RBP9.47□□□□□ -0.89
NEK1-203ENST00000507142 NUF2Q9BZD4 464 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 MIEF1Q9NQG6 463 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 PDE4DIPQ5VU43 2346 aa9.47□□□□□ -0.89
NEK1-203ENST00000507142 URADA6NGE7 173 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 CHADO15335 359 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 LILRB3O75022 631 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 JMJD7P0C870 316 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 RGS1Q08116 209 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 TSNAXIP1Q2TAA8 658 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 XKR4Q5GH76 650 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 LYSMD4Q5XG99 296 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 RRM2BQ7LG56 351 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 PRUNE1Q86TP1 453 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 SLC26A11Q86WA9 606 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 PPFIBP2Q8ND30 876 aa9.46□□□□□ -0.89
NEK1-203ENST00000507142 CPNE1Q99829 537 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms