RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LIG3P49916 1009 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 AGERQ15109 404 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 NOMO1Q15155 1222 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 SLC14A2Q15849 920 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 CDKL3Q8IVW4 592 aaPredicted RBP16.77■□□□□ 0.28
SNCA-209ENST00000506244 LRRN4Q8WUT4 740 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 HAUS1Q96CS2 278 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 TDRD1Q9BXT4 1180 aaKnown RBP16.77■□□□□ 0.28
SNCA-209ENST00000506244 IL21RQ9HBE5 538 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
SNCA-209ENST00000506244 B4GALT6Q9UBX8 382 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 CA5BQ9Y2D0 317 aa16.77■□□□□ 0.28
SNCA-209ENST00000506244 A0A1B0GTQ1 180 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 H0Y8X5 98 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 PSMD11O00231 422 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 PCDHGA12O60330 932 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 PRKCGP05129 697 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 CEACAM1P13688 526 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 VIPR1P32241 457 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 NOVA1P51513 510 aaKnown RBP16.76■□□□□ 0.27
SNCA-209ENST00000506244 CLDN2P57739 230 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 ADCY2Q08462 1091 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 RALGDSQ12967 914 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 ARHGEF7Q14155 803 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 LRRC14Q15048 493 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 TEX44Q53QW1 395 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 PPM1JQ5JR12 505 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 SEL1L2Q5TEA6 688 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 ZC3H18Q86VM9 953 aaKnown RBP16.76■□□□□ 0.27
SNCA-209ENST00000506244 NAXDQ8IW45 347 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNCA-209ENST00000506244 TTC13Q8NBP0 860 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 OR13H1Q8NG92 308 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 ARRDC2Q8TBH0 407 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 IFT43Q96FT9 208 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 NSMCE3Q96MG7 304 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 AGAP3Q96P47 875 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 MCCC1Q96RQ3 725 aaPredicted RBP16.76■□□□□ 0.27
SNCA-209ENST00000506244 KLF6Q99612 283 aaPredicted RBP16.76■□□□□ 0.27
SNCA-209ENST00000506244 ADGRE3Q9BY15 652 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 SLC25A51Q9H1U9 297 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 LZTFL1Q9NQ48 299 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 PACSIN2Q9UNF0 486 aaPredicted RBP16.76■□□□□ 0.27
SNCA-209ENST00000506244 ASCC3Q8N3C0 2202 aaKnown RBP16.76■□□□□ 0.27
SNCA-209ENST00000506244 TMEM131Q92545 1883 aa16.76■□□□□ 0.27
SNCA-209ENST00000506244 H7C0C1 242 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 RAD51BO15315 384 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 DDX3YO15523 660 aaKnown RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 FZD6O60353 706 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 STK10O94804 968 aaKnown RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 PYGMP11217 842 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 CD59P13987 128 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 ZNF30P17039 623 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 ITIH2P19823 946 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 KCNA4P22459 653 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 PTPN3P26045 913 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 EPHA8P29322 1005 aaPredicted RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 CD86P42081 329 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 GRK6P43250 576 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 TNNT3P45378 269 aaPredicted RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 ATP5OP48047 213 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 YPEL5P62699 121 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 OTUD4Q01804 1114 aaKnown RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 PTK2BQ14289 1009 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 LIPIQ6XZB0 460 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 Q6ZSR6 202 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 PIP4P1Q86T03 277 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 PARGQ86W56 976 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 CNTD1Q8N815 330 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 TP53I13Q8NBR0 393 aaPredicted RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 TRIM58Q8NG06 486 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 ACTL9Q8TC94 416 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 HTR3CQ8WXA8 447 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 CENPTQ96BT3 561 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 SCRN2Q96FV2 425 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 IMP4Q96G21 291 aaKnown RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 CEP41Q9BYV8 373 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 PCDH9Q9HC56 1237 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 GPR27Q9NS67 375 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 KLHL8Q9P2G9 620 aaPredicted RBP16.75■□□□□ 0.27
SNCA-209ENST00000506244 PPP2R2CQ9Y2T4 447 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 PPIL1Q9Y3C6 166 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 DNAH14Q0VDD8 3507 aa16.75■□□□□ 0.27
SNCA-209ENST00000506244 DOCK9Q9BZ29 2069 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 POM121BA6NF01 834 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 HEXIM1O94992 359 aaKnown RBP16.74■□□□□ 0.27
SNCA-209ENST00000506244 KCNK5O95279 499 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 TRBC1P01850 177 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 IGFALSP35858 605 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 RXRGP48443 463 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 THOP1P52888 689 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 PFN3P60673 137 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 SKOR1P84550 965 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 NIPAL4Q0D2K0 466 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 ACOX1Q15067 660 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 IRF4Q15306 451 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 PSAPL1Q6NUJ1 521 aa16.74■□□□□ 0.27
SNCA-209ENST00000506244 SPATS2Q86XZ4 545 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms