RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF761Q86XN6 746 aaPredicted RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 IRF2BP1Q8IU81 584 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ARFGAP1Q8N6T3 406 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ATP11CQ8NB49 1132 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ATL2Q8NHH9 583 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 GRIN3AQ8TCU5 1115 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SNX29Q8TEQ0 813 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 PPP4R1Q8TF05 950 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 POMGNT1Q8WZA1 660 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF516Q92618 1163 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 KCNB2Q92953 911 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 AZIN2Q96A70 460 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 PSMB7Q99436 277 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF559Q9BR84 538 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 CBWD1Q9BRT8 395 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 DPEP2Q9H4A9 486 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 VRTNQ9H8Y1 702 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ARHGEF38Q9NXL2 777 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 DNAJB12Q9NXW2 375 aaKnown RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ARMCX1Q9P291 453 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 HECAQ9UBI9 543 aaPredicted RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 KLQ9UEF7 1012 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ADGRE2Q9UHX3 823 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SH3BGRL2Q9UJC5 107 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TINAGQ9UJW2 476 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 STRIP2Q9ULQ0 834 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 HS3ST2Q9Y278 367 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF835Q9Y2P0 537 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 OR1A2Q9Y585 309 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 VWFP04275 2813 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 FREM1Q5H8C1 2179 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TRIM49BA6NDI0 452 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ATMINO43313 823 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 SLC26A4O43511 780 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TSPAN6O43657 245 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CREB3O43889 395 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 BNIP3LO60238 219 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TOXO94900 526 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF202O95125 648 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 UNC5CO95185 931 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CTDNEP1O95476 244 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TNFP01375 233 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 PRNPP04156 253 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 PLEKP08567 350 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FDPSP14324 419 aaKnown RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CCNB1P14635 433 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ITIH2P19823 946 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 AK4P27144 223 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ADORA2BP29275 332 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 KRT2P35908 639 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 NNMTP40261 264 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FASLGP48023 281 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 IRAK1P51617 712 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 SMSP52788 366 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 DGKQP52824 942 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 MYL6P60660 151 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CENPCQ03188 943 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 SULT2A1Q06520 285 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 SGCGQ13326 291 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 NNTQ13423 1086 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TRIM29Q14134 588 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 IL11RAQ14626 422 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 INPP5AQ14642 412 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 KCNAB1Q14722 419 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF169Q14929 603 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ACCSLQ4AC99 568 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 IZUMO3Q5VZ72 239 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FAAH2Q6GMR7 532 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 RPUSD3Q6P087 351 aaKnown RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 MSANTD2Q6P1R3 559 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 GFRALQ6UXV0 394 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 Q6ZPB1 254 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 DPY19L3Q6ZPD9 716 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CXorf67Q86X51 503 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 CIR1Q86X95 450 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 PELI3Q8N2H9 469 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ZADH2Q8N4Q0 377 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 UBR7Q8N806 425 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 BCORP1Q8N888 145 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 SLC38A9Q8NBW4 561 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 KIAA1524Q8TCG1 905 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ZDHHC1Q8WTX9 485 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 PTCD2Q8WV60 388 aaKnown RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 LARP4BQ92615 738 aaKnown RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TAF4BQ92750 862 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ANKRD36BP1Q96IX9 119 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 LCORQ96JN0 433 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TNIP3Q96KP6 325 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FCRL2Q96LA5 508 aaPredicted RBP3.35□□□□□ -1.87
TCOF1-208ENST00000506063 WDR92Q96MX6 357 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 OR6C1Q96RD1 312 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 DMRTA2Q96SC8 542 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 ESYT1Q9BSJ8 1104 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 FEM1AQ9BSK4 669 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 APOOQ9BUR5 198 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 KCND2Q9NZV8 630 aa3.35□□□□□ -1.87
TCOF1-208ENST00000506063 TAAR2Q9P1P5 351 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms