RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 RAB11FIP2Q7L804 512 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 IRF2BP2Q7Z5L9 587 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 CLEC14AQ86T13 490 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 SFTPA2Q8IWL1 248 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 FBXO39Q8N4B4 442 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 ARFGAP1Q8N6T3 406 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 Q8N9G6 341 aaPredicted RBP11.44□□□□□ -0.58
SIL1-208ENST00000505945 ANKRD20A12PQ8NF67 263 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 TTC9Q92623 222 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 PDXPQ96GD0 296 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 LIN37Q96GY3 246 aaPredicted RBP11.44□□□□□ -0.58
SIL1-208ENST00000505945 WDR92Q96MX6 357 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 ERGIC2Q96RQ1 377 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 TUBGCP5Q96RT8 1024 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 RBM15Q96T37 977 aaKnown RBP eCLIP11.44□□□□□ -0.58
SIL1-208ENST00000505945 ATP13A3Q9H7F0 1226 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 MRPL40Q9NQ50 206 aaKnown RBP11.44□□□□□ -0.58
SIL1-208ENST00000505945 DONSONQ9NYP3 566 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 PCSK1NQ9UHG2 260 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 AP4E1Q9UPM8 1137 aa11.44□□□□□ -0.58
SIL1-208ENST00000505945 CAPN8A6NHC0 703 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 ARHGAP42A6NI28 874 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 EEF2KO00418 725 aaKnown RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 EFSO43281 561 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 DAPK3O43293 454 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 RECQL5O94762 991 aaPredicted RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 HGFP14210 728 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 FERP16591 822 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 DESP17661 470 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 TNFAIP3P21580 790 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 PSMA2P25787 234 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 SERPINA4P29622 427 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 SLC5A2P31639 672 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 HTR7P34969 479 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 UGT1A5P35504 534 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 CSNK1DP48730 415 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 INHBCP55103 352 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 RALGDSQ12967 914 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 ERMARDQ5T6L9 678 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 LIPIQ6XZB0 460 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 ARHGAP36Q6ZRI8 547 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 APTXQ7Z2E3 356 aaKnown RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 TAF8Q7Z7C8 310 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 JAMLQ86YT9 394 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 ARHGAP12Q8IWW6 846 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 FAM46DQ8NEK8 389 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 GPR156Q8NFN8 814 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 OR56A4Q8NGH8 313 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 ATL2Q8NHH9 583 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 OR1E3Q8WZA6 343 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 FUBP1Q96AE4 644 aaKnown RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 NSMCE3Q96MG7 304 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 SNRNP25Q9BV90 132 aaKnown RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 CINPQ9BW66 212 aaPredicted RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 TRIM7Q9C029 511 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 STRADBQ9C0K7 418 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 HSD3B7Q9H2F3 369 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 LRRN3Q9H3W5 708 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 FGF22Q9HCT0 170 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 PARVAQ9NVD7 372 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 ANO10Q9NW15 660 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
SIL1-208ENST00000505945 DGKBQ9Y6T7 804 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 LRP4O75096 1905 aa11.43□□□□□ -0.58
SIL1-208ENST00000505945 TTC24A2A3L6 582 aaPredicted RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 CFAP69A5D8W1 941 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 D6RAR5 112 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 TMX2-CTNND1H3BSU7 103 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 J3QKU1 62 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 DFFAO00273 331 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 CACNB4O00305 520 aaPredicted RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 ATMINO43313 823 aaPredicted RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 KRT10P13645 584 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 ERCC2P18074 760 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 SCNN1BP51168 640 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 POLR2LP62875 67 aaKnown RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 BCL2L1Q07817 233 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 NSUN2Q08J23 767 aaKnown RBP eCLIP11.42□□□□□ -0.58
SIL1-208ENST00000505945 NCAPHQ15003 741 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 TGIF1Q15583 401 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 PPP6R3Q5H9R7 873 aaPredicted RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 AFMIDQ63HM1 303 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 OGFOD3Q6PK18 319 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 RFX8Q6ZV50 586 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 CCNJLQ8IV13 435 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 TP53INP2Q8IXH6 220 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 PELI3Q8N2H9 469 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 NPWQ8N729 165 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 OR6C4Q8NGE1 309 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 CCL4L1Q8NHW4 92 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 ECHDC3Q96DC8 303 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 CCNL2Q96S94 520 aaPredicted RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 KCTD15Q96SI1 283 aaPredicted RBP11.42□□□□□ -0.58
SIL1-208ENST00000505945 SYT11Q9BT88 431 aa11.42□□□□□ -0.58
SIL1-208ENST00000505945 LGR4Q9BXB1 951 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms