RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SETD6Q8TBK2 473 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 PROKR1Q8TCW9 393 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 WIPF2Q8TF74 440 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZFPM2Q8WW38 1151 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 IP6K1Q92551 441 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 SECISBP2LQ93073 1101 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZNF622Q969S3 477 aaKnown RBP eCLIP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 LRRC59Q96AG4 307 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 PABPC5Q96DU9 382 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 ELMOD3Q96FG2 381 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 SIN3AQ96ST3 1273 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 SEPT5Q99719 369 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 GPATCH1Q9BRR8 931 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 CWC25Q9NXE8 425 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 WSB2Q9NYS7 404 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 LRIT1Q9P2V4 623 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 CTNNAL1Q9UBT7 734 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 IPO11Q9UI26 975 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 OSGIN1Q9UJX0 560 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 PADI1Q9ULC6 663 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 EXO1Q9UQ84 846 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 FRMD4BQ9Y2L6 1034 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 CMAHPQ9Y471 501 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 MAU2Q9Y6X3 613 aa4.01□□□□□ -1.77
TRAPPC13-208ENST00000505553 MAST3O60307 1309 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 MST1RQ04912 1400 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 LINC00473A8K010 186 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 NPIPB11E5RHQ5 1161 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 ADAMDEC1O15204 470 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 PSMD10O75832 226 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 NFATC1O95644 943 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 LCKP06239 509 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 ERCC2P18074 760 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 TRIM21P19474 475 aaKnown RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 ATP5F1P24539 256 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 PTAFRP25105 342 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 EPHB2P29323 1055 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 IDUAP35475 653 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 SOX2P48431 317 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 CYP4F2P78329 520 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 MRPS35P82673 323 aaKnown RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 HOXA4Q00056 320 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 CAMK2DQ13557 499 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 GRAPQ13588 217 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 TCTN1Q2MV58 587 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 COL28A1Q2UY09 1125 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 SOWAHCQ53LP3 525 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 CXorf66Q5JRM2 361 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 KRBOX4Q5JUW0 171 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 DAB2IPQ5VWQ8 1189 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC2A7Q6PXP3 512 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 IGFN1Q86VF2 1251 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 TDRPQ86YL5 185 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 EPHX4Q8IUS5 362 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 DHX40Q8IX18 779 aaKnown RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 MCEMP1Q8IX19 187 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 FAM185AQ8N0U4 392 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 NUP93Q8N1F7 819 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZCCHC9Q8N567 271 aaKnown RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 TMEM217Q8N7C4 229 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 KIF18AQ8NI77 898 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 CDHR1Q96JP9 859 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 PAFAH2Q99487 392 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 THUMPD3Q9BV44 507 aaKnown RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 GATA5Q9BWX5 397 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 NUF2Q9BZD4 464 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 WDR11Q9BZH6 1224 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 HIPK3Q9H422 1215 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 DENND2DQ9H6A0 471 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-208ENST00000505553 BPIFA1Q9NP55 256 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 SETD4Q9NVD3 440 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 ASIC5Q9NY37 505 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 TUBE1Q9UJT0 475 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 PACSIN3Q9UKS6 424 aa4□□□□□ -1.77
TRAPPC13-208ENST00000505553 TYW5A2RUC4 315 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 URADA6NGE7 173 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 UBE2Q2LH0YL09 131 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 DAB1O75553 588 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 HKR1P10072 659 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CYP2D6P10635 497 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 FDPSP14324 419 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 IL7RP16871 459 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 KLRC2P26717 231 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 HOXC13P31276 330 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CIITAP33076 1130 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 TCF7P36402 384 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ATP6V1E1P36543 226 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CENPAP49450 140 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CLCNKBP51801 687 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CSE1LP55060 971 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 PPP2R5CQ13362 524 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 KCNC3Q14003 757 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 USP41Q3LFD5 358 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZNF805Q5CZA5 627 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 IGSF11Q5DX21 431 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 C6orf141Q5SZD1 244 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CEP85Q6P2H3 762 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 SHQ1Q6PI26 577 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CFAP77Q6ZQR2 320 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms