RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 SBK2P0C263 348 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 VPREB1P12018 145 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ACTN1P12814 892 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 PFKFB1P16118 471 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF182P17025 639 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 EPORP19235 508 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 TNFRSF1AP19438 455 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ANXA7P20073 488 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 EDN2P20800 178 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DRD4P21917 467 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MATN1P21941 496 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MYF6P23409 242 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 IL4RP24394 825 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 AZGP1P25311 298 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 HOXA13P31271 388 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 GABRB2P47870 512 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 FASLGP48023 281 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 LIMS1P48059 325 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARSEP51690 589 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CDH13P55290 713 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC37A1P57057 533 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RPS7P62081 194 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RAE1P78406 368 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ECT2LQ008S8 904 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 GALK2Q01415 458 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 TAP2Q03519 686 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DEUP1Q05D60 604 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RBPJQ06330 500 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 TRA2AQ13595 282 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 KARSQ15046 597 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MAPK11Q15759 364 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 BOLA3Q53S33 107 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DNTTIP2Q5QJE6 756 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 C12orf60Q5U649 245 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SHEQ5VZ18 495 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 FAM91A1Q658Y4 838 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CES5AQ6NT32 575 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CASC4Q6P4E1 433 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZCCHC12Q6PEW1 402 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MEX3BQ6ZN04 569 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CFAP77Q6ZQR2 320 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZBTB49Q6ZSB9 765 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MICALCLQ6ZW33 695 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DOK3Q7L591 496 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 TAOK1Q7L7X3 1001 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CACNA2D4Q7Z3S7 1137 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RALYLQ86SE5 291 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZDHHC13Q8IUH4 622 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARID3BQ8IVW6 561 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ELOA2Q8IYF1 753 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADGRG5Q8IZF4 528 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 MRPL43Q8N983 215 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SCAIQ8N9R8 606 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RBM15BQ8NDT2 890 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 OR7G3Q8NG95 312 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 OR56A1Q8NGH5 318 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 OR8K5Q8NH50 307 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CFAP61Q8NHU2 1237 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 GRAPLQ8TC17 118 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 GLMPQ8WWB7 406 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZC3HAV1LQ96H79 300 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 WDYHV1Q96HA8 205 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CNDP1Q96KN2 507 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CEP295NLQ96MC4 621 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPATA13Q96N96 652 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 EGFL8Q99944 293 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 KATNB1Q9BVA0 655 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 IFT27Q9BW83 186 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 GLIS2Q9BZE0 524 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 RTN4RQ9BZR6 473 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 TRIM2Q9C040 744 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CHMP4BQ9H444 224 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 PDZD7Q9H5P4 517 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DNAJC18Q9H819 358 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 SYTL2Q9HCH5 934 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 BPIFA1Q9NP55 256 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 PALMDQ9NP74 551 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 TRIM36Q9NQ86 728 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 PIH1D3Q9NQM4 214 aaKnown RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 OLAHQ9NV23 265 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 CRNNQ9UBG3 495 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 HACL1Q9UJ83 578 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 FBXW11Q9UKB1 542 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF148Q9UQR1 794 aa3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF644Q9H582 1327 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P22-201ENST00000505315 A0A1B0GTW7 788 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 A0A1B0GVM2 712 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 MYADML2A6NDP7 307 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRR19A6NJB7 356 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZAR1LA6NP61 321 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM110-MUSTN1A8MSY1 372 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 TTC34A8MYJ7 566 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 KDM4EB2RXH2 506 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 FAM86B1E9PN63 330 aa3.69□□□□□ -1.82
HMGB1P22-201ENST00000505315 H0YIN7 160 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms