RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FAM118BQ9BPY3 351 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SPON2Q9BUD6 331 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CDH19Q9H159 772 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC6A17Q9H1V8 727 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CNOT6Q9ULM6 557 aaKnown RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SLC8A2Q9UPR5 921 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SPO11Q9Y5K1 396 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 WDFY4Q6ZS81 3184 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 MT-CYBP00156 380 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZSCAN5DPP0CG00 497 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 HMGCLP35914 325 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 PFN3P60673 137 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SFSWAPQ12872 951 aaKnown RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 ANKRD22Q5VYY1 191 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 LIPIQ6XZB0 460 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 DBX2Q6ZNG2 339 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 PCGF5Q86SE9 256 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TMEM135Q86UB9 458 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CAMK1DQ8IU85 385 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 CEP112Q8N8E3 955 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 GPR150Q8NGU9 434 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 MAGOHBQ96A72 148 aaKnown RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TBL1YQ9BQ87 522 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TEX101Q9BY14 249 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 FOXP3Q9BZS1 431 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 DDX47Q9H0S4 455 aaKnown RBP8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 SEMA4AQ9H3S1 761 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 PCDH12Q9NPG4 1184 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 DMTF1Q9Y222 760 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 HS3ST3A1Q9Y663 406 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 TEX264Q9Y6I9 313 aa8.32□□□□□ -1.08
CDC42SE2-208ENST00000505065 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ECEL1O95672 775 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 KRT14P02533 472 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ARNTP27540 789 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 GKP32189 559 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 HNF1BP35680 557 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 RPL21P46778 160 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 KCNJ1P48048 391 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 MAXP61244 160 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 BCL2L1Q07817 233 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 STARD3Q14849 445 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TAF1AQ15573 450 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 LINC00523Q86TU6 105 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 RASGRP3Q8IV61 690 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 NOA1Q8NC60 698 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 KLHL32Q96NJ5 620 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 HHIPQ96QV1 700 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 NLE1Q9NVX2 485 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 IL17CQ9P0M4 197 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 PILRBQ9UKJ0 227 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TMPRSS11EQ9UL52 423 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 GOLGA6L10A0A0M3HER8 536 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 H7C0C1 242 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TSHRP16473 764 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 DPP6P42658 865 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ATP5OP48047 213 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ARCN1P48444 511 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 DR1Q01658 176 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ELP6Q0PNE2 266 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 B4GALNT4Q76KP1 1039 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 PPIL6Q8IXY8 311 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZCCHC9Q8N567 271 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.31□□□□□ -1.082e-12■■■■■ 54.4
CDC42SE2-208ENST00000505065 DTD2Q96FN9 168 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.31□□□□□ -1.082e-9■■□□□ 13
CDC42SE2-208ENST00000505065 HACD3Q9P035 362 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 RSPH14Q9UHP6 348 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 AXIN1O15169 862 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 CA4P22748 312 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 PLK5Q496M5 336 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 CCDC89Q8N998 374 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TSTD1Q8NFU3 115 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 OR13J1Q8NGT2 312 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 IFT43Q96FT9 208 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 IRF2BPLQ9H1B7 796 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TRPM6Q9BX84 2022 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRP3O75074 770 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 FAM155BO75949 473 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ITIH2P19823 946 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 POLR2LP62875 67 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 C2orf54Q08AI8 447 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZDHHC20Q5W0Z9 365 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 LEKR1Q6ZMV7 388 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 PRUNE1Q86TP1 453 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 MMAAQ8IVH4 418 aaKnown RBP8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZNF366Q8N895 744 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 BRSK1Q8TDC3 778 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 NSMCE1Q8WV22 266 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 SIPA1Q96FS4 1042 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ERVMER34-1Q9H9K5 563 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 ZDHHC4Q9NPG8 344 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 RAB21Q9UL25 225 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 PCDHGA5Q9Y5G8 931 aa8.31□□□□□ -1.08
CDC42SE2-208ENST00000505065 TTI1O43156 1089 aa8.3□□□□□ -1.08
CDC42SE2-208ENST00000505065 STK10O94804 968 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms