RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 DHX40Q8IX18 779 aaKnown RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 PARP16Q8N5Y8 322 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 ANKRD52Q8NB46 1076 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 GPT2Q8TD30 523 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 SMARCE1Q969G3 411 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 HMCESQ96FZ2 354 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 NR1H4Q96RI1 486 aaPredicted RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 MXRA8Q9BRK3 442 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 RBM38Q9H0Z9 239 aaKnown RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 RANBP17Q9H2T7 1088 aaKnown RBP3.35□□□□□ -1.87
RFC1-209ENST00000504974 BPIFA1Q9NP55 256 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 A4GNTQ9UNA3 340 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.35□□□□□ -1.87
RFC1-209ENST00000504974 FGD6Q6ZV73 1430 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 A2ML1A8K2U0 1454 aa3.35□□□□□ -1.87
RFC1-209ENST00000504974 KDM5DQ9BY66 1539 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 VWDEQ8N2E2 1590 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 DNMT1P26358 1616 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 RNF17Q9BXT8 1623 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 CLTCQ00610 1675 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 ZC3H13Q5T200 1668 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 PGPEP1LA6NFU8 196 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 NPIPB15A6NHN6 443 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 BECN2A8MW95 431 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 B4DGG1 531 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 MS4A18H0YCH9 400 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 I6L893 689 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 CHL1O00533 1208 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 TNFRSF13BO14836 293 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 TGFB1I1O43294 461 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 LDB2O43679 373 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 ITM2AO43736 263 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 SEC14L2O76054 403 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 CRYABP02511 175 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 HEXAP06865 529 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 KRT10P13645 584 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 SRD5A1P18405 259 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 TNFRSF1BP20333 461 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 CAPN3P20807 821 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 SCP2P22307 547 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 CHMP24386 653 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 NFKBIAP25963 317 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 DCTDP32321 178 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 ICAM3P32942 547 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 RYKP34925 604 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 CPOXP36551 454 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 THPOP40225 353 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 PBX3P40426 434 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 NR4A2P43354 598 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 PMS2P54278 862 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 SELENOVP59797 346 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 SETQ01105 290 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 SRSF1Q07955 248 aaKnown RBP eCLIP3.34□□□□□ -1.87
RFC1-209ENST00000504974 FAM27E3Q08E93 113 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 GOLGA8DPQ0D2H9 430 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 TMEM115Q12893 351 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 FOXD4Q12950 439 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 FRG1Q14331 258 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 LPIN1Q14693 890 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 RNPS1Q15287 305 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 MED22Q15528 200 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 MAPRE1Q15691 268 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 GSTA3Q16772 222 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 COL28A1Q2UY09 1125 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 PLEKHO1Q53GL0 409 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 ESCO2Q56NI9 601 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 GPATCH4Q5T3I0 446 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 C11orf87Q6NUJ2 197 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 CDC73Q6P1J9 531 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 LCTLQ6UWM7 567 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 C4orf50Q6ZRC1 276 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 TMTC3Q6ZXV5 915 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 MON1BQ7L1V2 547 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 ZNF367Q7RTV3 350 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 IRF2BP2Q7Z5L9 587 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 MB21D2Q8IYB1 491 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 PDILTQ8N807 584 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 MCPH1Q8NEM0 835 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 ZMIZ2Q8NF64 920 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 ASB5Q8WWX0 329 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 GTF3C6Q969F1 213 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 PABPC5Q96DU9 382 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 BARD1Q99728 777 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 TMEM79Q9BSE2 394 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 H2AFJQ9BTM1 129 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 C1QTNF7Q9BXJ2 289 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 FAM234AQ9H0X4 552 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 BRF2Q9HAW0 419 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 DIAPH3Q9NSV4 1193 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 NDRG3Q9UGV2 375 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 LIMA1Q9UHB6 759 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 SRPRBQ9Y5M8 271 aaKnown RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 KCNE2Q9Y6J6 123 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 PIAS3Q9Y6X2 628 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 A3GALT2U3KPV4 340 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 ZNF644Q9H582 1327 aaPredicted RBP3.34□□□□□ -1.87
RFC1-209ENST00000504974 KDM3AQ9Y4C1 1321 aa3.34□□□□□ -1.87
RFC1-209ENST00000504974 CFAP65Q6ZU64 1925 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms