RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 CENPTQ96BT3 561 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 SCRN2Q96FV2 425 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 IMP4Q96G21 291 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 KLHDC7BQ96G42 594 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 BMFQ96LC9 184 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 TEKT5Q96M29 485 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 MCCC1Q96RQ3 725 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 VAT1Q99536 393 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 SLC25A51Q9H1U9 297 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 KCNF1Q9H3M0 494 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 ERVMER34-1Q9H9K5 563 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 GDF3Q9NR23 364 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 B4GALT6Q9UBX8 382 aa18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 FNDC3AQ9Y2H6 1198 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-209ENST00000503346 PLXNA2O75051 1894 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 PI4KAP42356 2102 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 A6NNZ2 444 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 FPGTO14772 594 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 PRLP01236 227 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 PTMAP06454 111 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 THEGLP0DJG4 465 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 CD86P42081 329 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 RPL26P61254 145 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 SEMG2Q02383 582 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 KLF1Q13351 362 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 SLC14A2Q15849 920 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 LIPIQ6XZB0 460 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 USP45Q70EL2 814 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 SPATS2Q86XZ4 545 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 NDUFAF2Q8N183 169 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 TP53I13Q8NBR0 393 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 TRIM58Q8NG06 486 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 OR13H1Q8NG92 308 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 HTR3CQ8WXA8 447 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 TADA1Q96BN2 335 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 ELF4Q99607 663 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 GLOD4Q9HC38 313 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 GPR27Q9NS67 375 aa18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 RPL26L1Q9UNX3 145 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-209ENST00000503346 A0A1B0GTQ1 180 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 GOLGA6L9A6NEM1 432 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 POM121BA6NF01 834 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 H7C0C1 242 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 KCNK3O14649 394 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 ELFN1P0C7U0 828 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 CYP2A6P11509 494 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 CD59P13987 128 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 VIPR1P32241 457 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 ATP5OP48047 213 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 PFN3P60673 137 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 GSE1Q14687 1217 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 RPS6KA1Q15418 735 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 FAM182AQ5T1J6 154 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 Q6ZSR6 202 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 DCP2Q8IU60 420 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 CDKL3Q8IVW4 592 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 OXR1Q8N573 874 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 TTC13Q8NBP0 860 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 PCDH9Q9HC56 1237 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 TM7SF3Q9NS93 570 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 CHKBQ9Y259 395 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 COQ6Q9Y2Z9 468 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 PCDHGB2Q9Y5G2 931 aa18.3■□□□□ 0.52
PDLIM7-209ENST00000503346 A0A0J9YYE9 177 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 LZTS3O60299 673 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 ZNF189O75820 626 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 HEXIM1O94992 359 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 TRBC1P01850 177 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 RBP3P10745 1247 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 GM2AP17900 193 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 LHCGRP22888 699 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 RBL1P28749 1068 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 CD68P34810 354 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 IGFALSP35858 605 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 RABIFP47224 123 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 RXRGP48443 463 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 CCT8P50990 548 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 EIF3EP60228 445 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 CNGA3Q16281 694 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 WSCD2Q2TBF2 565 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 PIP4P1Q86T03 277 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 ZNF567Q8N184 647 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 SLC22A18ASQ8N1D0 253 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 CBARPQ8N350 705 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 RBM15Q96T37 977 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 CARD9Q9H257 536 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 MBNL1Q9NR56 388 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 KLHL8Q9P2G9 620 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 TRHDEQ9UKU6 1024 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 SHROOM3Q8TF72 1996 aa18.29■□□□□ 0.52
PDLIM7-209ENST00000503346 DCDC2BA2VCK2 349 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 NPIPB15A6NHN6 443 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 A8MX80 341 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 PSMD11O00231 422 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 TOR1BO14657 336 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 YKT6O15498 198 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 PCDHGA12O60330 932 aa18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 RECQL5O94762 991 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-209ENST00000503346 CTPS1P17812 591 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms