RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SPAG4Q9NPE6 437 aa5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 PNRC2Q9NPJ4 139 aaKnown RBP5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 SEMA4GQ9NTN9 838 aa5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 WSB2Q9NYS7 404 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 PADI1Q9ULC6 663 aa5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 CEPT1Q9Y6K0 416 aa5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 WIZO95785 1651 aa5.46□□□□□ -1.54
HMGB1P3-201ENST00000502802 KIR2DS5A0A0G2JLQ3 304 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 KIR2DS3K7RE56 304 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 PRPF4O43172 522 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 PAPSS1O43252 624 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 KLK8O60259 260 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 MITFO75030 526 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 TBCAO75347 108 aaKnown RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 LIG4P49917 911 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 PNLIPRP2P54317 469 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 RAD23AP54725 363 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ITGADQ13349 1161 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 SLC9C1Q4G0N8 1177 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 TMEM119Q4V9L6 283 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ESCO2Q56NI9 601 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 SGO1Q5FBB7 561 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 C9orf152Q5JTZ5 239 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 MEX3CQ5U5Q3 659 aaKnown RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 FCRLBQ6BAA4 426 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 FBXO46Q6PJ61 603 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 QSOX2Q6ZRP7 698 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 KDELC2Q7Z4H8 507 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ARHGEF25Q86VW2 580 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 HACE1Q8IYU2 909 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 LRRC57Q8N9N7 239 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 TDRD5Q8NAT2 981 aaKnown RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 HUS1BQ8NHY5 278 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ZNF653Q96CK0 615 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ZNF333Q96JL9 665 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 PAFAH2Q99487 392 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 KIFC3Q9BVG8 833 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ERVMER34-1Q9H9K5 563 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ARHGEF38Q9NXL2 777 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 PPIEQ9UNP9 301 aaKnown RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 CMAHPQ9Y471 501 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 TRPV2Q9Y5S1 764 aa5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 ZNF644Q9H582 1327 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P3-201ENST00000502802 LOC100509620A0A075B734 347 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 A0A087X1B8 175 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 A8MXE2 369 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 F8W810 466 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 ADAMDEC1O15204 470 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 MMP2P08253 660 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 MMP3P08254 477 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 QDPRP09417 244 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 TFPIP10646 304 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 ACTN1P12814 892 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 SORDQ00796 357 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 TFF2Q03403 129 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 CFHR1Q03591 330 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 KLF10Q13118 480 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 CAPSQ13938 189 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 SOWAHAQ2M3V2 549 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 MIDNQ504T8 468 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 LRCH2Q5VUJ6 765 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 OLFML1Q6UWY5 402 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 GALNTL5Q7Z4T8 443 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 HAPLN4Q86UW8 402 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 GALNT13Q8IUC8 556 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 DENND6AQ8IWF6 608 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 SLC35F3Q8IY50 421 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 CCDC13Q8IYE1 715 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 MINDY1Q8N5J2 469 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 ZBTB2Q8N680 514 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 HJURPQ8NCD3 748 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 OR14L1PQ8NHC6 308 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 ATP6V1E2Q96A05 226 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 LRRC59Q96AG4 307 aaKnown RBP5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 TMCO6Q96DC7 493 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 SLC41A2Q96JW4 573 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 SH2D3AQ9BRG2 576 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 ADPGKQ9BRR6 497 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 EDEM3Q9BZQ6 932 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 AAMDCQ9H7C9 122 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 ANKRD10Q9NXR5 420 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 C5AR2Q9P296 337 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 EXO1Q9UQ84 846 aaKnown RBP5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 CCL27Q9Y4X3 112 aa5.44□□□□□ -1.54
HMGB1P3-201ENST00000502802 LRRC72A6NJI9 287 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 AVILO75366 819 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 GPC4O75487 556 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 MTA2O94776 668 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 GGPS1O95749 300 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 ABCB1P08183 1280 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 MYZAPP0CAP1 466 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 VDRP11473 427 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 SCG2P13521 617 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 ENO3P13929 434 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 TRIM21P19474 475 aaKnown RBP5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 TNFSF8P32971 234 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 KRT83P78385 493 aa5.43□□□□□ -1.54
HMGB1P3-201ENST00000502802 NAE1Q13564 534 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms