RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 LILRA2Q8N149 483 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 SNX31Q8N9S9 440 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 ICA1LQ8NDH6 482 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 KLHDC9Q8NEP7 349 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 ZNF483Q8TF39 744 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-204ENST00000501271 TADA1Q96BN2 335 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 CCDC126Q96EE4 140 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 MYEOVQ96EZ4 313 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 TSPAN17Q96FV3 270 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 C8orf48Q96LL4 319 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 GBP5Q96PP8 586 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 MFSD1Q9H3U5 465 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 FBXO44Q9H4M3 255 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 ALG9Q9H6U8 611 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 VWA7Q9Y334 891 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 CHD5Q8TDI0 1954 aa9.9□□□□□ -0.82
CLIP1-204ENST00000501271 GBF1Q92538 1859 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 EME2A4GXA9 379 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 TXNDC9O14530 226 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 ACOT8O14734 319 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 AHCYL1O43865 530 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 BCAS2O75934 225 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 S1PR4O95977 384 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 HMBSP08397 361 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 RBP1P09455 135 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PIM1P11309 404 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 TSPAN8P19075 237 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 CCND3P30281 292 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 OR1G1P47890 313 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 FLT3LGP49771 235 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PRAMEP78395 509 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 FOLH1Q04609 750 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PTK2BQ14289 1009 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 GRM2Q14416 872 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PTPRCAPQ14761 206 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PDK3Q15120 406 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 ARMC3Q5W041 872 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 CLEC6AQ6EIG7 209 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 CCSAPQ6IQ19 270 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 GLB1LQ6UWU2 654 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 CYHR1Q6ZMK1 362 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 COLGALT2Q8IYK4 626 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PCDH20Q8N6Y1 951 aaKnown RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 ATAD1Q8NBU5 361 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 SPDYE1Q8NFV5 336 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 FUBP3Q96I24 572 aaKnown RBP eCLIP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 BTBD9Q96Q07 612 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 COPS7BQ9H9Q2 264 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 EML4Q9HC35 981 aaKnown RBP9.9□□□□□ -0.83
CLIP1-204ENST00000501271 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 NOD1Q9Y239 953 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 CRYL1Q9Y2S2 319 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 PCDHGA7Q9Y5G6 932 aa9.9□□□□□ -0.83
CLIP1-204ENST00000501271 LOC285095A0A1B0GVY8 99 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 FBP2O00757 339 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 MUSKO15146 869 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 MT-CO1P00395 513 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 SLC4A1P02730 911 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 ACVRL1P37023 503 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 GRIA2P42262 883 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 INHBCP55103 352 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 TNK2Q07912 1038 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 SQLEQ14534 574 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 TLR1Q15399 786 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 NFE2Q16621 373 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-204ENST00000501271 FAM26DQ5JW98 314 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
CLIP1-204ENST00000501271 ZFP1Q6P2D0 407 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 UGT2A3Q6UWM9 527 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 ISCA2Q86U28 154 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 PTERQ96BW5 349 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 FAR2Q96K12 515 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 BTN2A3PQ96KV6 586 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 TBATAQ96M53 351 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 FAM192AQ9GZU8 254 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 RGS18Q9NS28 235 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 SPATS2LQ9NUQ6 558 aaKnown RBP9.89□□□□□ -0.83
CLIP1-204ENST00000501271 ADA2Q9NZK5 511 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 CCDC167Q9P0B6 97 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 TBC1D30Q9Y2I9 924 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 ARL5AQ9Y689 179 aa9.89□□□□□ -0.83
CLIP1-204ENST00000501271 PRSS51A0A1B0GVH4 220 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 E7ENX8 843 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 UBDO15205 165 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 RAMP2O60895 175 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 YWHAQP27348 245 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 PSME3P61289 254 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 IRX1P78414 480 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 TIAL1Q01085 375 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 LRP8Q14114 963 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 FASTKQ14296 549 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 SEMA3AQ14563 771 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 MBTPS1Q14703 1052 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 POLD3Q15054 466 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ZNF678Q5SXM1 525 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 RARS2Q5T160 578 aaKnown RBP9.88□□□□□ -0.83
CLIP1-204ENST00000501271 REP15Q6BDI9 236 aa9.88□□□□□ -0.83
CLIP1-204ENST00000501271 ZNF549Q6P9A3 640 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms