RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 PCID2Q5JVF3 399 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 EOGTQ5NDL2 527 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
SCG5-209ENST00000498607 STEAP4Q687X5 459 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 CASC4Q6P4E1 433 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 ZSWIM9Q86XI8 627 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 GJD3Q8N144 294 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 PPHLN1Q8NEY8 458 aaKnown RBP11.72□□□□□ -0.53
SCG5-209ENST00000498607 PIP4K2CQ8TBX8 421 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 CFAP36Q96G28 342 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 SRPK1Q96SB4 655 aaKnown RBP11.72□□□□□ -0.53
SCG5-209ENST00000498607 NELL2Q99435 816 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 KIFC1Q9BW19 673 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 PABPC3Q9H361 631 aaKnown RBP11.72□□□□□ -0.53
SCG5-209ENST00000498607 LTB4R2Q9NPC1 389 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 HACD3Q9P035 362 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 ZC3H7BQ9UGR2 993 aaKnown RBP11.72□□□□□ -0.53
SCG5-209ENST00000498607 PPM1HQ9ULR3 514 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 PHTF1Q9UMS5 762 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 SOX13Q9UN79 622 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 PPIL1Q9Y3C6 166 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
SCG5-209ENST00000498607 A0A0J9YYE9 177 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 KANSL1LA0AUZ9 987 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 CAPN8A6NHC0 703 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 UPK3BL1B0FP48 263 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 UPK3BL2E5RIL1 263 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 C1QTNF3-AMACRE9PGA6 284 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 KPNA3O00505 521 aaPredicted RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 RNASEH1O60930 286 aaKnown RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 SPAG6O75602 509 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 TRBC1P01850 177 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 GSTA2P09210 222 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 CHRNB1P11230 501 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 HOXB2P14652 356 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 ADRA1DP25100 572 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 ITGB7P26010 798 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 HSD17B3P37058 310 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 POLR2LP62875 67 aaKnown RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 LAMB3Q13751 1172 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 POU6F1Q14863 301 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 KYNUQ16719 465 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 FAM46CQ5VWP2 391 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 DENND2CQ68D51 928 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 ZNF776Q68DI1 518 aaPredicted RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 PKN3Q6P5Z2 889 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 UNC5AQ6ZN44 842 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 USP45Q70EL2 814 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 PALM2Q8IXS6 379 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 NDUFAF2Q8N183 169 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 SIX5Q8N196 739 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 TXNDC5Q8NBS9 432 aaKnown RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 RPLP0P6Q8NHW5 317 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 BRSK1Q8TDC3 778 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 BLOC1S5Q8TDH9 187 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 UBLCP1Q8WVY7 318 aaPredicted RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 PPP1R16AQ96I34 528 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 MCCC1Q96RQ3 725 aaPredicted RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 RSPH9Q9H1X1 276 aaPredicted RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 EPB41L4BQ9H329 900 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 TRABDQ9H4I3 376 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 MAGEE1Q9HCI5 957 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 MUTYHQ9UIF7 546 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 SARDHQ9UL12 918 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 MMP17Q9ULZ9 603 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 SPO11Q9Y5K1 396 aa11.71□□□□□ -0.53
SCG5-209ENST00000498607 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
SCG5-209ENST00000498607 SCN8AQ9UQD0 1980 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 C16orf96A6NNT2 1141 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 RIPK2O43353 540 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 USP1O94782 785 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 ACSL3O95573 720 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 CRTAMO95727 393 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 ADH1BP00325 375 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 IL1BP01584 269 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 PRKCGP05129 697 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 POLBP06746 335 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 PIRTP0C851 137 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 CTPS1P17812 591 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 NFKBIAP25963 317 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 SLC8A1P32418 973 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 PSMD8P48556 350 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 SUOXP51687 545 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 FRG1Q14331 258 aaKnown RBP11.7□□□□□ -0.54
SCG5-209ENST00000498607 CASP8Q14790 479 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 CRYMQ14894 314 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 UBXN2BQ14CS0 331 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 TAF1AQ15573 450 aaPredicted RBP11.7□□□□□ -0.54
SCG5-209ENST00000498607 SPANXN3Q5MJ09 141 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 PARS2Q7L3T8 475 aaKnown RBP11.7□□□□□ -0.54
SCG5-209ENST00000498607 NLRP9Q7RTR0 991 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 TMEM135Q86UB9 458 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 MMAAQ8IVH4 418 aaKnown RBP11.7□□□□□ -0.54
SCG5-209ENST00000498607 TTC30BQ8N4P2 665 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 OR2T3Q8NH03 318 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 PEX13Q92968 403 aa11.7□□□□□ -0.54
SCG5-209ENST00000498607 ZNF669Q96BR6 464 aaPredicted RBP11.7□□□□□ -0.54
SCG5-209ENST00000498607 SCRN2Q96FV2 425 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms