RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SFTPCP11686 197 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 UCHL3P15374 230 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 PNLIPP16233 465 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 MMP8P22894 467 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 TLE1Q04724 770 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 SERINC3Q13530 473 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 CAMK4Q16566 473 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 HSP90AA4PQ58FG1 418 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 ZNF574Q6ZN55 896 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 DNAAF5Q86Y56 855 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 OR56A4Q8NGH8 313 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 CCL4L1Q8NHW4 92 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 SLC30A5Q8TAD4 765 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 JPH3Q8WXH2 748 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 CENPIQ92674 756 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 FUBP1Q96AE4 644 aaKnown RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 C11orf70Q9BRQ4 267 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 TMEM168Q9H0V1 697 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 SLC25A18Q9H1K4 315 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 SUV39H2Q9H5I1 410 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 RDH14Q9HBH5 336 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 NOCTQ9UK39 431 aaKnown RBP14.79□□□□□ -0.04
TRAF4-212ENST00000498540 PCDHB11Q9Y5F2 797 aa14.79□□□□□ -0.04
TRAF4-212ENST00000498540 BUB1BO60566 1050 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-212ENST00000498540 CYP1A1P04798 512 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-212ENST00000498540 CCL4P13236 92 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 CD82P27701 267 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 EPHB2P29323 1055 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 KIAA1024LP59773 190 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 B4GALNT1Q00973 533 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 RALGDSQ12967 914 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 ARHGEF7Q14155 803 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 TPD52L1Q16890 204 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-212ENST00000498540 SPECC1LQ69YQ0 1117 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 ERAP2Q6P179 960 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 CAMK1DQ8IU85 385 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 HCAR2Q8TDS4 363 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 PMEPA1Q969W9 287 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 NTAN1Q96AB6 310 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 TUBGCP2Q9BSJ2 902 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 DPEP2Q9H4A9 486 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 GEMIN8Q9NWZ8 242 aaKnown RBP14.78□□□□□ -0.04
TRAF4-212ENST00000498540 ATP8A1Q9Y2Q0 1164 aa14.78□□□□□ -0.04
TRAF4-212ENST00000498540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 CACNB4O00305 520 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 NUDT21O43809 227 aaKnown RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 RECQL5O94762 991 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 CHRNB2P17787 502 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 RGRP47804 291 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 ARSDP51689 593 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 MAZP56270 477 aaKnown RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 YBEYP58557 167 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 FMO1Q01740 532 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 AMZ1Q400G9 498 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 CFAP58Q5T655 872 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 BRAT1Q6PJG6 821 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 SLFN11Q7Z7L1 901 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 PELI3Q8N2H9 469 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 RCBTB1Q8NDN9 531 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 LGR4Q9BXB1 951 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 SLC12A9Q9BXP2 914 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 STK33Q9BYT3 514 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 PDFQ9HBH1 243 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 CYP4F12Q9HCS2 524 aa14.77□□□□□ -0.05
TRAF4-212ENST00000498540 UBA2Q9UBT2 640 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-212ENST00000498540 J3KR12 359 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 PES1O00541 588 aaKnown RBP14.76□□□□□ -0.05
TRAF4-212ENST00000498540 B4GAT1O43505 415 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 CREB3O43889 395 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 GFPT2O94808 682 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 CPNE6O95741 557 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 GM2AP17900 193 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 RFC1P35251 1148 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-212ENST00000498540 OR1D5P58170 312 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 CDR2Q01850 454 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 PTP4A2Q12974 167 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 GRM3Q14832 879 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 PARP15Q460N3 678 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 EFHC2Q5JST6 749 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 PTRH1Q86Y79 214 aaKnown RBP14.76□□□□□ -0.05
TRAF4-212ENST00000498540 FAM114A1Q8IWE2 563 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 UMODL1-AS1Q8N2C9 162 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 ZNF641Q96N77 438 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-212ENST00000498540 NUDT22Q9BRQ3 303 aa14.76□□□□□ -0.05
TRAF4-212ENST00000498540 PRSS38A1L453 326 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 WASH4PA8MWX3 477 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 STMND1H3BQB6 276 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 TNFRSF10CO14798 259 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 ELFN1P0C7U0 828 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 KRT3P12035 628 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 GPD1P21695 349 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 TMEM164Q5U3C3 297 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 WDR59Q6PJI9 974 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 LIPIQ6XZB0 460 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 ZNF438Q7Z4V0 828 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 PIM3Q86V86 326 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 ZNF677Q86XU0 584 aa14.75□□□□□ -0.05
TRAF4-212ENST00000498540 MLKLQ8NB16 471 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms