RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 PRDM8Q9NQV8 689 aa12.73□□□□□ -0.37
TRIM27-207ENST00000498117 PILRAQ9UKJ1 303 aa12.73□□□□□ -0.37
TRIM27-207ENST00000498117 CHD5Q8TDI0 1954 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 CENPEQ02224 2701 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 TMEM202A6NGA9 273 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 ZSCAN5CA6NGD5 496 aaPredicted RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 BECN2A8MW95 431 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 BUB1O43683 1085 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 SMC2O95347 1197 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 HOXC4P09017 264 aaPredicted RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 TCN2P20062 427 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 KRT9P35527 623 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 MAPKAPK2P49137 400 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 LIG3P49916 1009 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 MAZP56270 477 aaKnown RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 PTK2Q05397 1052 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 UGP2Q16851 508 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 PTPN20Q4JDL3 420 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 CRTC2Q53ET0 693 aaPredicted RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 TCTN3Q6NUS6 607 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 HEATR4Q86WZ0 1026 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 EFCAB3Q8N7B9 438 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 GALNT11Q8NCW6 608 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 CCL4L1Q8NHW4 92 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 FUBP1Q96AE4 644 aaKnown RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 CYP4F12Q9HCS2 524 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 MRPL40Q9NQ50 206 aaKnown RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 DNAI1Q9UI46 699 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 MOSPD1Q9UJG1 213 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 TP53TG5Q9Y2B4 290 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
TRIM27-207ENST00000498117 ARHGEF17Q96PE2 2063 aaPredicted RBP12.72□□□□□ -0.37
TRIM27-207ENST00000498117 ANKRD17O75179 2603 aaKnown RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 LOC101059948A0A1B0GTJ6 334 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 KDELR3O43731 214 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 RAMP2O60895 175 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 TMCC1O94876 653 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 THRAP10827 490 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 RHOQP17081 205 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 MAN1A1P33908 653 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 SCNN1AP37088 669 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 STAT1P42224 750 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 UQCRFS1P47985 274 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 ABHD18Q0P651 414 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 SQSTM1Q13501 440 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 INO80DQ53TQ3 878 aaPredicted RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 ANKS6Q68DC2 871 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 CAPRIN2Q6IMN6 1127 aaKnown RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 RWDD4Q6NW29 188 aaKnown RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 FAM129CQ86XR2 697 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 TRIM59Q8IWR1 403 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 PLA2G15Q8NCC3 412 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 ZDHHC1Q8WTX9 485 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 GSDMCQ9BYG8 508 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 SPRY4Q9C004 299 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 TRIT1Q9H3H1 467 aaKnown RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 PCDH12Q9NPG4 1184 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 SPATS2LQ9NUQ6 558 aaKnown RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 NDFIP2Q9NV92 336 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 CUEDC1Q9NWM3 386 aaPredicted RBP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 OCIAD1Q9NX40 245 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 KCTD3Q9Y597 815 aa12.71□□□□□ -0.37
TRIM27-207ENST00000498117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRIM27-207ENST00000498117 LRP4O75096 1905 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 CFAP69A5D8W1 941 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 ECEL1O95672 775 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 GNA14O95837 355 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 FGF1P05230 155 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 CCNB1P14635 433 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 GNLYP22749 145 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 TRIM23P36406 574 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 PPP1R2P41236 205 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 RHOAP61586 193 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 NRG1Q02297 640 aaPredicted RBP12.7□□□□□ -0.38
TRIM27-207ENST00000498117 PEX6Q13608 980 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 GRM3Q14832 879 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
TRIM27-207ENST00000498117 NKAIN2Q5VXU1 208 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 TMEM71Q6P5X7 295 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 KDELC2Q7Z4H8 507 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 NLRP14Q86W24 1093 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 FAM131BQ86XD5 332 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 ZNF354CQ86Y25 554 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 CCDC13Q8IYE1 715 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 UNC5BQ8IZJ1 945 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 STARD8Q92502 1023 aa12.7□□□□□ -0.38
TRIM27-207ENST00000498117 SMARCE1Q969G3 411 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms