RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FBXW8Q8N3Y1 598 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 POU5F2Q8N7G0 328 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 NEK11Q8NG66 645 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 OR7G3Q8NG95 312 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 RASSF8Q8NHQ8 419 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CFAP61Q8NHU2 1237 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ABHD4Q8TB40 342 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CCDC110Q8TBZ0 833 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ST7LQ8TDW4 575 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 PABPC5Q96DU9 382 aaKnown RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 CEP295NLQ96MC4 621 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 EGFL8Q99944 293 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 TCF25Q9BQ70 676 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF350Q9GZX5 532 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 NUAK2Q9H093 628 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 DPH5Q9H2P9 285 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 WBP11Q9Y2W2 641 aaKnown RBP6.19□□□□□ -1.42
BRCA1-224ENST00000497488 FANCAO15360 1455 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 NEO1Q92859 1461 aa6.19□□□□□ -1.42
BRCA1-224ENST00000497488 PLCH2O75038 1416 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 AP3B1O00203 1094 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 NKX2-2O95096 273 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 BCL10O95999 233 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 ADAP00813 363 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 CCDC159P0C7I6 412 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 PDHBP11177 359 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 KELP23276 732 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 ADRA1DP25100 572 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 VIPR1P32241 457 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 MATR3P43243 847 aaKnown RBP eCLIP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 TNNT2P45379 298 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 SULT1E1P49888 294 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 GRSF1Q12849 480 aaKnown RBP eCLIP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 COX10Q12887 443 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 BMPR2Q13873 1038 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 KCNC3Q14003 757 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 SNAPC1Q16533 368 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 COL28A1Q2UY09 1125 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 C6orf136Q5SQH8 315 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 MARK2Q7KZI7 788 aaKnown RBP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 DHX40Q8IX18 779 aaKnown RBP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 MAML2Q8IZL2 1156 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 GHDCQ8N2G8 530 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 LPCAT1Q8NF37 534 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 FBXL20Q96IG2 436 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF558Q96NG5 402 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 CTAGE1Q96RT6 745 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 CDRT15Q96T59 188 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 PAK6Q9NQU5 681 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 UPB1Q9UBR1 384 aa6.18□□□□□ -1.42
BRCA1-224ENST00000497488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.18□□□□□ -1.42
BRCA1-224ENST00000497488 AKNAQ7Z591 1439 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 WIPF3A6NGB9 483 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 FAM86B1E9PN63 330 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 F5H697 171 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 HRKO00198 91 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 SPRY2O43597 315 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 AKAP3O75969 853 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ERBB2P04626 1255 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 HOXB5P09067 269 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF37AP17032 561 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 MATN1P21941 496 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 RPA1P27694 616 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 GSTM2P28161 218 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 SOAT1P35610 550 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CLCN3P51790 818 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 EPHB4P54760 987 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 NAGLUP54802 743 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ST8SIA6P61647 398 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 DEUP1Q05D60 604 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 NFYCQ13952 458 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 TAZQ16635 292 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 TWISTNBQ3B726 338 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CBWD6Q4V339 395 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CBWD3Q5JTY5 395 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 DNTTIP2Q5QJE6 756 aaKnown RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CCDC183Q5T5S1 534 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CES4AQ5XG92 561 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 FAM91A1Q658Y4 838 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 MCTP1Q6DN14 999 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 SLC25A24Q6NUK1 477 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 IL20RBQ6UXL0 311 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 SLC39A5Q6ZMH5 540 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ATG14Q6ZNE5 492 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 PRSS45Q7RTY3 260 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 SPATA21Q7Z572 469 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CAND1Q86VP6 1230 aaKnown RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 DNAAF1Q8NEP3 725 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 DBF4BQ8NFT6 615 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 OR10S1Q8NGN2 331 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 BRSK1Q8TDC3 778 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 CTNNBL1Q8WYA6 563 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 BCL2L2Q92843 193 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ZBTB8AQ96BR9 441 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 RSPRY1Q96DX4 576 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF512Q96ME7 567 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 OSBPL9Q96SU4 736 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms