RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CEP57L1Q8IYX8 460 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ADGRG5Q8IZF4 528 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 CARFQ8N187 725 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 CARNMT1Q8N4J0 409 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF808Q8N4W9 903 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PLD5Q8N7P1 536 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 FRMD1Q8N878 549 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PNPLA1Q8N8W4 532 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 NAT8LQ8N9F0 302 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 IL17RCQ8NAC3 791 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 XXYLT1Q8NBI6 393 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 MSANTD4Q8NCY6 345 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 GOT1L1Q8NHS2 421 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 GSDMBQ8TAX9 411 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 GDAP1Q8TB36 358 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ADAMTS17Q8TE56 1095 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM170AQ8WVE7 144 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 OSCP1Q8WVF1 389 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 RUFY2Q8WXA3 655 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ATRIPQ8WXE1 791 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ATG4AQ8WYN0 398 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 NCSTNQ92542 709 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 STAMQ92783 540 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 SECISBP2LQ93073 1101 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ATP6V1E2Q96A05 226 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 JAKMIP2Q96AA8 810 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 FAM136AQ96C01 138 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 KLHL29Q96CT2 875 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 LCORQ96JN0 433 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 SIGLEC10Q96LC7 697 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 CEP295NLQ96MC4 621 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 JAKMIP1Q96N16 626 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 DCLRE1CQ96SD1 692 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 NPLQ9BXD5 320 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 REXO4Q9GZR2 422 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 XYLT2Q9H1B5 865 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 NDST4Q9H3R1 872 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PDZD7Q9H5P4 517 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 CD248Q9HCU0 757 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 LTB4R2Q9NPC1 389 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 MBNL1Q9NR56 388 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 THAP1Q9NVV9 213 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 ANKMY1Q9P2S6 941 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 FBXO40Q9UH90 709 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 LEF1Q9UJU2 399 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 OSGIN1Q9UJX0 560 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PADI1Q9ULC6 663 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 CORO1CQ9ULV4 474 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 SORCS3Q9UPU3 1222 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 EXO1Q9UQ84 846 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 HDAC5Q9UQL6 1122 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PCDHGB5Q9Y5G0 923 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PCDHA10Q9Y5I2 948 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 SHROOM3Q8TF72 1996 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 UTYO14607 1347 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 MYO3BQ8WXR4 1341 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 IBTKQ9P2D0 1353 aaPredicted RBP2.57□□□□□ -2
CKS1BP2-201ENST00000497342 TLN2Q9Y4G6 2542 aa2.57□□□□□ -2
CKS1BP2-201ENST00000497342 PSME4Q14997 1843 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MYO10Q9HD67 2058 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 NBASA2RRP1 2371 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 LOC100509620A0A075B734 347 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 A0A087WV48 116 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 A0A1W2PRX2 142 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 GAGE12BA1L429 117 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 GAGE12HA6NDE8 117 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SMTNL1A8MU46 457 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CXCL11O14625 94 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TRIM24O15164 1050 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SPRY2O43597 315 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 SYNCRIPO60506 623 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 FMO6PO60774 539 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 VPS4BO75351 444 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 KCNK5O95279 499 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 C22orf31O95567 290 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 HEXAP06865 529 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ELANEP08246 267 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CCDC175P0C221 793 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 P4HA1P13674 534 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CR2P20023 1033 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 FGFR4P22455 802 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 PRPH2P23942 346 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ELAVL4P26378 380 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 ITPKBP27987 946 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CD6P30203 668 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 GKP32189 559 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 GP5P40197 560 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 TNNT3P45378 269 aaPredicted RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CLK3P49761 638 aaKnown RBP2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CSRP3P50461 194 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RRADP55042 308 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 NCKAP1LP55160 1127 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 STARD6P59095 220 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 RAC3P60763 192 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 PSMC6P62333 389 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 MC2RQ01718 297 aa2.56□□□□□ -2
CKS1BP2-201ENST00000497342 CDK18Q07002 472 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms