RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 MTA2O94776 668 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 F7P08709 466 aaPredicted RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ITGAXP20702 1163 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 UBE3AQ05086 875 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 SLC12A1Q13621 1099 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 SOWAHAQ2M3V2 549 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ZNF628Q5EBL2 1059 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 FAM122CQ6P4D5 195 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 RHBDF2Q6PJF5 856 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ADGRG6Q86SQ4 1221 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 EXOC3L1Q86VI1 746 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ANKRD18AQ8IVF6 992 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 GJC3Q8NFK1 279 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ARRDC2Q8TBH0 407 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 NR4A3Q92570 626 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 TRIM63Q969Q1 353 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 MTBPQ96DY7 904 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 ZSCAN31Q96LW9 406 aaPredicted RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 IL17FQ96PD4 163 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 OR1F2PQ96R84 312 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 PKP4Q99569 1192 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 PHF7Q9BWX1 381 aaPredicted RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 PRKRIP1Q9H875 184 aaPredicted RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 GPR52Q9Y2T5 361 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 NFE2L3Q9Y4A8 694 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 A3GALT2U3KPV4 340 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 MAGI3Q5TCQ9 1506 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 KIAA0586Q9BVV6 1533 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 KDM5DQ9BY66 1539 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 DENND4BO75064 1496 aaPredicted RBP4.29□□□□□ -1.72
TRIM4-205ENST00000496896 UHRF1BP1Q6BDS2 1440 aa4.29□□□□□ -1.72
TRIM4-205ENST00000496896 KIAA0556O60303 1618 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 RNF123Q5XPI4 1314 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 TCF20Q9UGU0 1960 aaKnown RBP4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HSPB2A8KAH6 182 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 TEX22C9J3V5 150 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 NPIPB11E5RHQ5 1161 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 DDNO94850 711 aaPredicted RBP4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HSPA5P11021 654 aaKnown RBP4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HSD3B1P14060 373 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 SLC2A4P14672 509 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 PSMC2P35998 433 aaKnown RBP4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HALP42357 657 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HDAC4P56524 1084 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 CHRNDQ07001 517 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HSPB2Q16082 182 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 FAM76BQ5HYJ3 339 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 SERTAD4-AS1Q5TG53 156 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 ATG16L1Q676U5 607 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 GSG1LQ6UXU4 331 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 FAM160B2Q86V87 743 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 C11orf65Q8NCR3 313 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 WFIKKN2Q8TEU8 576 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 STAMQ92783 540 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 SMYD2Q9NRG4 433 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 SMARCAL1Q9NZC9 954 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 HCN3Q9P1Z3 774 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 SLCO3A1Q9UIG8 710 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 CARD8Q9Y2G2 431 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 RAPGEF6Q8TEU7 1601 aa4.28□□□□□ -1.72
TRIM4-205ENST00000496896 RALGAPBQ86X10 1494 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 IFT140Q96RY7 1462 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 MRC2Q9UBG0 1479 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 GAGE10A6NGK3 116 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 BUB3O43684 328 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 PIP5K1CO60331 668 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 ATP2C2O75185 946 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 RAD23BP54727 409 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 RUNX2Q13950 521 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 ARHGEF6Q15052 776 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 AMZ1Q400G9 498 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 MOB3CQ70IA8 216 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 LRRC8DQ7L1W4 858 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
TRIM4-205ENST00000496896 TMTC1Q8IUR5 882 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 PARP16Q8N5Y8 322 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 EYA3Q99504 573 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 SLC32A1Q9H598 525 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 UBTD1Q9HAC8 227 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 EBF2Q9HAK2 575 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 RIC8AQ9NPQ8 531 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 BEX4Q9NWD9 120 aaPredicted RBP4.27□□□□□ -1.73
TRIM4-205ENST00000496896 KIAA1456Q9P272 454 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 LAMC1P11047 1609 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 KIAA1107Q9UPP5 1409 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 KDM5CP41229 1560 aa4.27□□□□□ -1.73
TRIM4-205ENST00000496896 BRD4O60885 1362 aaPredicted RBP4.27□□□□□ -1.73
TRIM4-205ENST00000496896 ATXN2Q99700 1313 aaKnown RBP4.26□□□□□ -1.73
TRIM4-205ENST00000496896 PLEKHH2Q8IVE3 1493 aa4.26□□□□□ -1.73
TRIM4-205ENST00000496896 A0A087WYN8 130 aa4.26□□□□□ -1.73
TRIM4-205ENST00000496896 SAA2-SAA4A0A096LPE2 208 aa4.26□□□□□ -1.73
TRIM4-205ENST00000496896 BMPR1BO00238 502 aa4.26□□□□□ -1.73
TRIM4-205ENST00000496896 TAF4O00268 1085 aa4.26□□□□□ -1.73
TRIM4-205ENST00000496896 KLK8O60259 260 aa4.26□□□□□ -1.73
TRIM4-205ENST00000496896 PEX14O75381 377 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms