RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 BCAP29Q9UHQ4 241 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 G3BP2Q9UN86 482 aaKnown RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 SLC38A8A6NNN8 435 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 S1PR4O95977 384 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 PENKP01210 267 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 ARSDP51689 593 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 IHHQ14623 411 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 C5orf22Q49AR2 442 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 RTP2Q5QGT7 225 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 TCHHL1Q5QJ38 904 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 NADSYN1Q6IA69 706 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 SDCCAG8Q86SQ7 713 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 DHDDSQ86SQ9 333 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 BRSK1Q8TDC3 778 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 CEP295NLQ96MC4 621 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 TRMOQ9BU70 441 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 VCXQ9H320 206 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 CRISPLD1Q9H336 500 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
CMSS1-208ENST00000496116 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 RIMKLBQ9ULI2 386 aa11.12□□□□□ -0.63
CMSS1-208ENST00000496116 NEMP2A6NFY4 417 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CD3EAPO15446 510 aaKnown RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 ACSL4O60488 711 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 NBNO60934 754 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 RPP40O75818 363 aaKnown RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 JUNP05412 331 aaKnown RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 HNRNPLP14866 589 aaKnown RBP eCLIP11.11□□□□□ -0.639e-8■■□□□ 11.7
CMSS1-208ENST00000496116 SLC11A2P49281 568 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 ART3Q13508 389 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CCNIQ14094 377 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 ALG1LQ6GMV1 187 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 IZUMO2Q6UXV1 221 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 RSPO2Q6UXX9 243 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CUZD1Q86UP6 607 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 NPAS4Q8IUM7 802 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 DSELQ8IZU8 1212 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PDZD8Q8NEN9 1154 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GPR150Q8NGU9 434 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CD99L2Q8TCZ2 262 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 SEPT8Q92599 483 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PHF21BQ96EK2 531 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 TBATAQ96M53 351 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 TTLL2Q9BWV7 592 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 SEZ6LQ9BYH1 1024 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 EFCAB1Q9HAE3 211 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PDFQ9HBH1 243 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CYP4F12Q9HCS2 524 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 TRPC7Q9HCX4 862 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 STK39Q9UEW8 545 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 VPS28Q9UK41 221 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CEP350Q5VT06 3117 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 TMEM233B4DJY2 109 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 NT5C1B-RDH14C9J2C7 533 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 SMIM24O75264 130 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 VNN2O95498 520 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CRTAMO95727 393 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GOT2P00505 430 aaKnown RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GALTP07902 379 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 OGNP20774 298 aaKnown RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 IMPDH1P20839 514 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GATMP50440 423 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 KCNQ1P51787 676 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CDKN2DP55273 166 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CDH4P55283 916 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GNA12Q03113 381 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 SULT2A1Q06520 285 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GSTA3Q16772 222 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PPM1LQ5SGD2 360 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 GPR158Q5T848 1215 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 TMEM198Q66K66 360 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 LHX8Q68G74 356 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 IL31Q6EBC2 164 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 BNC2Q6ZN30 1099 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 LDB1Q86U70 411 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PGAM4Q8N0Y7 254 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 ANKRD49Q8WVL7 239 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 ECSITQ9BQ95 431 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 MGME1Q9BQP7 344 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CINPQ9BW66 212 aaPredicted RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 MEAF6Q9HAF1 191 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 POPDC3Q9HBV1 291 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 CRYL1Q9Y2S2 319 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 COPG1Q9Y678 874 aaKnown RBP11.11□□□□□ -0.63
CMSS1-208ENST00000496116 ARL5AQ9Y689 179 aa11.11□□□□□ -0.63
CMSS1-208ENST00000496116 OR51F1A6NGY5 319 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 CCL22O00626 93 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 SDHDO14521 159 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 MUSKO15146 869 aa11.1□□□□□ -0.63
CMSS1-208ENST00000496116 SKAP2O75563 359 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms