RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 RIPK2O43353 540 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 HMGA1P17096 107 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 CYP2A7P20853 494 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 NRLP54845 237 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 PRKAA1Q13131 559 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 WDR93Q6P2C0 686 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 BRAT1Q6PJG6 821 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 CXorf40BQ96DE9 158 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 MED8Q96G25 268 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 SLCO3A1Q9UIG8 710 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 SMG5Q9UPR3 1016 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 IRAK3Q9Y616 596 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 SCAMP1O15126 338 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 RPP40O75818 363 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 RASGRP1O95267 797 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 RPN2P04844 631 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 CYP17A1P05093 508 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 ALADP13716 330 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 NCF2P19878 526 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 GLDCP23378 1020 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 CNTFP26441 200 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 NTSR1P30989 418 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 POU4F1Q01851 419 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 ZNF252P-AS1Q0IIN9 211 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 ZBTB17Q13105 803 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 GKAP1Q5VSY0 366 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 PKN3Q6P5Z2 889 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 UNC5AQ6ZN44 842 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 FCRL5Q96RD9 977 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 POMKQ9H5K3 350 aa9.5□□□□□ -0.89
GAPVD1-219ENST00000495955 CCL22O00626 93 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 NVLO15381 856 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 LILRB3O75022 631 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 PRAMEF12O95522 483 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 FTH1P02794 183 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 FAM153BP0C7A2 387 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 DRD1P21728 446 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 DNAJB1P25685 340 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 PTPN7P35236 360 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 CHRNA4P43681 627 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 GALK1P51570 392 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 CTBP1Q13363 440 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 PTPRNQ16849 979 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 FAM153CQ494X1 144 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 WDR75Q8IWA0 830 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SYTL1Q8IYJ3 562 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 UMODL1-AS1Q8N2C9 162 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 RPLP0P6Q8NHW5 317 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 ART4Q93070 314 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 CHRAC1Q9NRG0 131 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 FAM95CA0A1B0GW59 222 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 LEFTY1O75610 366 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 PRAMEF1O95521 474 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SRPRAP08240 638 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SLC6A11P48066 632 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 OCRLQ01968 901 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 GPNMBQ14956 572 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 TCEAL1Q15170 157 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SLC44A4Q53GD3 710 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 DUPD1Q68J44 220 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 RAVER1Q8IY67 606 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 CPT1BQ92523 772 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 CENPIQ92674 756 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 AZIN2Q96A70 460 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 GDF15Q99988 308 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 RETREG1Q9H6L5 497 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 H2AFYO75367 372 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 MYO1DO94832 1006 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 HIST2H2ACQ16777 129 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 FBXO43Q4G163 708 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SGO1Q5FBB7 561 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 HIST2H2AA3Q6FI13 130 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SPRED2Q7Z698 418 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 TMPRSS6Q8IU80 811 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 ZSWIM3Q96MP5 696 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 NDNQ99608 321 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 VN1R3Q9BXE9 311 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 K7ERQ8 282 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 CDK14O94921 469 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 SNX30Q5VWJ9 437 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 TMC3Q7Z5M5 1100 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 STYXQ8WUJ0 223 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 NUS1Q96E22 293 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 PITPNM3Q9BZ71 974 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 GULP1Q9UBP9 304 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 DCDC2Q9UHG0 476 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 ZNF711Q9Y462 761 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 DYRK1BQ9Y463 629 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 NME7Q9Y5B8 376 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 ARL5AQ9Y689 179 aa9.49□□□□□ -0.89
GAPVD1-219ENST00000495955 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 ARHGAP10A1A4S6 786 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 C16orf96A6NNT2 1141 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 SYCE1LA8MT33 242 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 SPECC1L-ADORA2AF8WAN1 911 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 QSOX1O00391 747 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 MAGEC1O60732 1142 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 METTL18O95568 372 aa9.48□□□□□ -0.89
GAPVD1-219ENST00000495955 SPDYAQ5MJ70 313 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms