RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PATJQ8NI35 1801 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 ACACBO00763 2458 aa6.85□□□□□ -1.31
VIM-207ENST00000495528 A0A1W2PS29 197 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 SLC38A8A6NNN8 435 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 E9PMD0 336 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 F5H697 171 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 BTN3A1O00481 513 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 LRP3O75074 770 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 VNN2O95498 520 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 OR4Q2P0C623 313 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 MCF2P10911 925 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 HARSP12081 509 aaKnown RBP6.84□□□□□ -1.31
VIM-207ENST00000495528 MUTP22033 750 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 FDXRP22570 491 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 PROZP22891 400 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 GATA3P23771 443 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 CDC25AP30304 524 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 CCT6AP40227 531 aaKnown RBP6.84□□□□□ -1.31
VIM-207ENST00000495528 PRPHP41219 470 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 SCAPQ12770 1279 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 ORC2Q13416 577 aaPredicted RBP6.84□□□□□ -1.31
VIM-207ENST00000495528 STXBP5Q5T5C0 1151 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 ARL6IP4Q66PJ3 421 aaKnown RBP6.84□□□□□ -1.31
VIM-207ENST00000495528 ADALQ6DHV7 355 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 ZNF280DQ6N043 979 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 Q6ZS52 159 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 USP49Q70CQ1 688 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 USP51Q70EK9 711 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 PPP1R32Q7Z5V6 425 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 LONP2Q86WA8 852 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 TMC8Q8IU68 726 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 DAW1Q8N136 415 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 SLC15A4Q8N697 577 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 APPL2Q8NEU8 664 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 BEST2Q8NFU1 509 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 CSGALNACT1Q8TDX6 532 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 KBTBD7Q8WVZ9 684 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 TTC17Q96AE7 1141 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 EPSTI1Q96J88 318 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 PGLYRP2Q96PD5 576 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 TCHPQ9BT92 498 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 GPR88Q9GZN0 384 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 SLITRK6Q9H5Y7 841 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 CASS4Q9NQ75 786 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 ASAH2Q9NR71 780 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 SACM1LQ9NTJ5 587 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 DDX19AQ9NUU7 478 aaKnown RBP6.84□□□□□ -1.31
VIM-207ENST00000495528 TBCCD1Q9NVR7 557 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 LRWD1Q9UFC0 647 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 MAFFQ9ULX9 164 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 NEU2Q9Y3R4 380 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 YIPF1Q9Y548 306 aa6.84□□□□□ -1.31
VIM-207ENST00000495528 PHLPP2Q6ZVD8 1323 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 A0A1B0GVL5 298 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 MYBPHLA2RUH7 354 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 PP2D1A8MPX8 630 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 SPECC1L-ADORA2AF8WAN1 911 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 M0QZQ0 153 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 MYO1CO00159 1063 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 LAD1O00515 517 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 CHADO15335 359 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 SLC16A4O15374 487 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 PAPSS2O95340 614 aaPredicted RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 HRGP04196 525 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 GDF5P43026 501 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 SPAG1Q07617 926 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 FCHO2Q0JRZ9 810 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 MAPK7Q13164 816 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 SLC13A2Q13183 592 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 CTBP1Q13363 440 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 PDIA5Q14554 519 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 ZRSR1Q15695 479 aaKnown RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 COBLL1Q53SF7 1204 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 DGKKQ5KSL6 1271 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 N4BP2L1Q5TBK1 243 aaPredicted RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 HAUS3Q68CZ6 603 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 RINT1Q6NUQ1 792 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 ARID3BQ8IVW6 561 aaPredicted RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 YAF2Q8IY57 180 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 FSIP1Q8NA03 581 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 LEMD2Q8NC56 503 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 SLC30A5Q8TAD4 765 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 ZFYVE19Q96K21 471 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 Q96MF0 132 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 PLIN2Q99541 437 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 NTPCRQ9BSD7 190 aaKnown RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 C8orf33Q9H7E9 229 aaPredicted RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 RXFP3Q9NSD7 469 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 GEMIN8Q9NWZ8 242 aaKnown RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 GTSE1Q9NYZ3 720 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 XPR1Q9UBH6 696 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 HESX1Q9UBX0 185 aa6.83□□□□□ -1.32
VIM-207ENST00000495528 ING1Q9UK53 422 aaPredicted RBP6.83□□□□□ -1.32
VIM-207ENST00000495528 PIPSLA2A3N6 862 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 TMEM233B4DJY2 109 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 MYO1FO00160 1098 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 TOM1L1O75674 476 aa6.82□□□□□ -1.32
VIM-207ENST00000495528 SOAT2O75908 522 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms