RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PQLC3Q8N755 202 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 SLC35G2Q8TBE7 412 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 FAM174AQ8TBP5 190 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 FAM71BQ8TC56 605 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 HCAR2Q8TDS4 363 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 CTNNBL1Q8WYA6 563 aaPredicted RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 RAPGEF5Q92565 580 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 IFT43Q96FT9 208 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 ZNF599Q96NL3 588 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 NUDCD1Q96RS6 583 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 MGME1Q9BQP7 344 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 APOOQ9BUR5 198 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 LRRC61Q9BV99 259 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 NHEJ1Q9H9Q4 299 aaPredicted RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 SCUBE2Q9NQ36 999 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 MRPL40Q9NQ50 206 aaKnown RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 NLGN3Q9NZ94 848 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 TFR2Q9UP52 801 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 KNTC1P50748 2209 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 ADAMTS20P59510 1910 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 SSU72P8A0A1W2PR75 194 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 CPED1A4D0V7 1026 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 H3BM21 787 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 HTRA2O43464 458 aaPredicted RBP10.66□□□□□ -0.7
NELFE-213ENST00000494956 C1SP09871 688 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 TMEM253P0C7T8 217 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ELFN1P0C7U0 828 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 CKMT1AP12532 417 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 TNNT1P13805 278 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 TSHRP16473 764 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 GARSP41250 739 aaKnown RBP10.66□□□□□ -0.7
NELFE-213ENST00000494956 RENBPP51606 427 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 AP1S1P61966 158 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 DSC2Q02487 901 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 GBE1Q04446 702 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ITKQ08881 620 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 TBX2Q13207 712 aaPredicted RBP10.66□□□□□ -0.7
NELFE-213ENST00000494956 TRIM14Q14142 442 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 PTK2BQ14289 1009 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ACOX1Q15067 660 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ALG11Q2TAA5 492 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 PERM1Q5SV97 790 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 MARC1Q5VT66 337 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 MACC1Q6ZN28 852 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 RFLNAQ6ZTI6 216 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 TSPAN33Q86UF1 283 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ZSCAN30Q86W11 494 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 SFTPA2Q8IWL1 248 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 LGR4Q9BXB1 951 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 C1QTNF7Q9BXJ2 289 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 UVRAGQ9P2Y5 699 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 PCDHB1Q9Y5F3 818 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 DMXL2Q8TDJ6 3036 aa10.66□□□□□ -0.7
NELFE-213ENST00000494956 ASPMQ8IZT6 3477 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 NEMP2A6NFY4 417 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 TMEM202A6NGA9 273 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 NPIPB15A6NHN6 443 aaPredicted RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 YY2O15391 372 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 ZZEF1O43149 2961 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 OPA1O60313 960 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 MT-CO3P00414 261 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 CPP00450 1065 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 ALPIP09923 528 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 ALPPL2P10696 532 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 TGM2P21980 687 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 LHCGRP22888 699 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 KDELR1P24390 212 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 SERPINB6P35237 376 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 HNF1BP35680 557 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 SUOXP51687 545 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 SRP54P61011 504 aaKnown RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 YPEL5P62699 121 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 PPARDQ03181 441 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 NIPAL4Q0D2K0 466 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 GALNT2Q10471 571 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 NFATC4Q14934 902 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 PAFAH1B3Q15102 231 aaKnown RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 LLGL1Q15334 1064 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 CNGA3Q16281 694 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 KIF26BQ2KJY2 2108 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 HS1BP3Q53T59 392 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 NPNTQ6UXI9 565 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 HSD11B1LQ7Z5J1 315 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 SLC35F3Q8IY50 421 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 PDCD7Q8N8D1 485 aaKnown RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 IFI44Q8TCB0 444 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 OR1E3Q8WZA6 343 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 PDXPQ96GD0 296 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 CRELD1Q96HD1 420 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 IL12RB2Q99665 862 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 SEMA3CQ99985 751 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 GOLPH3Q9H4A6 298 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 SUDS3Q9H7L9 328 aaPredicted RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 ZNHIT6Q9NWK9 470 aaKnown RBP10.65□□□□□ -0.7
NELFE-213ENST00000494956 SIRPGQ9P1W8 387 aa10.65□□□□□ -0.7
NELFE-213ENST00000494956 RCOR3Q9P2K3 495 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms