RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 NT5C1B-RDH14C9J2C7 533 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 TMEM189-UBE2V1I3L0A0 370 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 SLC22A2O15244 555 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 LDB2O43679 373 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 PAPSS2O95340 614 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 MT-CO1P00395 513 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 TCN1P20061 433 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 ADSLP30566 484 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 DPP6P42658 865 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 MAGEA11P43364 429 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 TM4SF4P48230 202 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 GATMP50440 423 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 AQP4P55087 323 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 MS4A2Q01362 244 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 IL10RBQ08334 325 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 SERINC3Q13530 473 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 CEACAM7Q14002 265 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 GALNT3Q14435 633 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 ZNF423Q2M1K9 1284 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 OR52E8Q6IFG1 317 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 RSPO2Q6UXX9 243 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 ABI1Q8IZP0 508 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 OR52K2Q8NGK3 314 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 SPPL2BQ8TCT7 592 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 EXT2Q93063 718 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 CCDC126Q96EE4 140 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 UBXN10Q96LJ8 280 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 GLT1D1Q96MS3 346 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 NR1H4Q96RI1 486 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 TCAF2A6NFQ2 919 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 SYN3O14994 580 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 MUSKO15146 869 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 TRPA1O75762 1119 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 SUPT7LO94864 414 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 GOT2P00505 430 aaKnown RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 LYNP07948 512 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 CST5P28325 142 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 KCNQ1P51787 676 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 C1QTNF8P60827 252 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 DUSP4Q13115 394 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 FLOT2Q14254 428 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 GSTA3Q16772 222 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 PPP1R3AQ16821 1122 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 GRAMD1BQ3KR37 738 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 PIGGQ5H8A4 983 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 IL31Q6EBC2 164 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 MAELQ96JY0 434 aaKnown RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 DNAJC1Q96KC8 554 aaKnown RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 VCX3BQ9H321 246 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 IL37Q9NZH6 218 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHMP3-209ENST00000494623 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
CHMP3-209ENST00000494623 PATJQ8NI35 1801 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 MAP3K13O43283 966 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 GPC4O75487 556 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 GLP2RO95838 553 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 PBX3P40426 434 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 MRPS22P82650 360 aaKnown RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 ZNF235Q14590 738 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 CLEC6AQ6EIG7 209 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 NADSYN1Q6IA69 706 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 ISCA2Q86U28 154 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 LGI2Q8N0V4 545 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 PGAM4Q8N0Y7 254 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 PCDH20Q8N6Y1 951 aaKnown RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 SNX31Q8N9S9 440 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 FAM156AQ8NDB6 213 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 PHC3Q8NDX5 983 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 FATE1Q969F0 183 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 TUBGCP5Q96RT8 1024 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 MRPL1Q9BYD6 325 aaKnown RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 OLA1Q9NTK5 396 aaKnown RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 ADA2Q9NZK5 511 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 TRAF6Q9Y4K3 522 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 CCDC162PA2VCL2 907 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 TXNDC9O14530 226 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 CD3EAPO15446 510 aaKnown RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 RNASEH1O60930 286 aaKnown RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 RTN3O95197 1032 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-209ENST00000494623 ALDH2P05091 517 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 ME2P23368 584 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 CDH13P55290 713 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 HERC3Q15034 1050 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 PARP15Q460N3 678 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 AFAP1L2Q8N4X5 818 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 TRPC7Q9HCX4 862 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 HTTP42858 3142 aa11.24□□□□□ -0.61
CHMP3-209ENST00000494623 FNDC1Q4ZHG4 1894 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-209ENST00000494623 ATP6AP2A0A1C7CYW4 349 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 FAM92AA1XBS5 289 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms