RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MED8Q96G25 268 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 WBP1Q96G27 269 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC17A9Q9BYT1 436 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 TRIM7Q9C029 511 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 THSD1Q9NS62 852 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 GPR27Q9NS67 375 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 CDC23Q9UJX2 597 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 TBC1D30Q9Y2I9 924 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 IGLON5A6NGN9 336 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 A6NNZ2 444 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 ZNF487B1APH4 448 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 TNFSF15O95150 251 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 CSF2P04141 144 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 KRT1P04264 644 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 GP1BAP07359 652 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 RHOCP08134 193 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 ALPPL2P10696 532 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 HGFP14210 728 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 NME1P15531 152 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 ITIH2P19823 946 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 RBMS1P29558 406 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 MIPP30301 263 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 UCNP55089 124 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 PDK2Q15119 407 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 LINC00303Q3SY05 128 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 EFHC2Q5JST6 749 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 C22orf39Q6P5X5 142 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC81Q6ZN84 652 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 SLC35F3Q8IY50 421 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 ZNF683Q8IZ20 524 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 CEP112Q8N8E3 955 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 TMIEQ8NEW7 156 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 OR6K2Q8NGY2 324 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 EXD1Q8NHP7 514 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 SNRNP27Q8WVK2 155 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 NTAN1Q96AB6 310 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 GOLPH3Q9H4A6 298 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 PIGVQ9NUD9 493 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 IL36AQ9UHA7 158 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 SLC12A6Q9UHW9 1150 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 RABGEF1Q9UJ41 708 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 HS3ST2Q9Y278 367 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 FCF1Q9Y324 198 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 FADS3Q9Y5Q0 445 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 MRFAP1Q9Y605 127 aa11.89□□□□□ -0.51
CSNK1E-212ENST00000494610 GOLGA6L10A0A0M3HER8 536 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 CDRT15L2A8MXV6 281 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 DDX3YO15523 660 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 AQP9O43315 295 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 JUNDP17535 347 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 HTR7P34969 479 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 PTPN7P35236 360 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 GJC1P36383 396 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 ABL2P42684 1182 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 DNA2P51530 1060 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 HNRNPKP61978 463 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 TUBB4BP68371 445 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 PPP2R5EQ16537 467 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 C15orf59Q2T9L4 293 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 TTC39BQ5VTQ0 682 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 TRNP1Q6NT89 227 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 ZCCHC8Q6NZY4 707 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 NEK5Q6P3R8 708 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 LEKR1Q6ZMV7 388 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 PARS2Q7L3T8 475 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 BNIPLQ7Z465 357 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC50Q8IVM0 306 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 RCOR2Q8IZ40 523 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 VOPP1Q96AW1 172 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 SPON2Q9BUD6 331 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 HDAC8Q9BY41 377 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 CLPBQ9H078 707 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 TKTL2Q9H0I9 626 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 DYRK4Q9NR20 520 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 RCOR3Q9P2K3 495 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 TTC7AQ9ULT0 858 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 PACSIN2Q9UNF0 486 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 DOPEY2Q9Y3R5 2298 aa11.88□□□□□ -0.51
CSNK1E-212ENST00000494610 LRRD1A4D1F6 860 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 NEMP2A6NFY4 417 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 CEP104O60308 925 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 CLDN11O75508 207 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 ADRB3P13945 408 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 DUSP3P51452 185 aaPredicted RBP11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 CDH4P55283 916 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms