RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 AMY1AP04745 511 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 PNPLA4P41247 253 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 LHX1P48742 406 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 GZMKP49863 264 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 CASP5P51878 434 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 PSMC1P62191 440 aaKnown RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 NKX6-1P78426 367 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 RBP5P82980 135 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 KCNB1Q14721 858 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ERAP2Q6P179 960 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 FAM171BQ6P995 826 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 RHBDF2Q6PJF5 856 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 LPCAT2Q7L5N7 544 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 DAAM2Q86T65 1068 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 TAX1BP1Q86VP1 789 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 DRC7Q8IY82 874 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 GPR135Q8IZ08 494 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 SYCP3Q8IZU3 236 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 IL17RCQ8NAC3 791 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 IFI44Q8TCB0 444 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 HMGB4Q8WW32 186 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 CASKIN2Q8WXE0 1202 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 LARP4BQ92615 738 aaKnown RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ARL8AQ96BM9 186 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 CNOT6LQ96LI5 555 aaKnown RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 AK8Q96MA6 479 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF560Q96MR9 790 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ACCSQ96QU6 501 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 MMS19Q96T76 1030 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 STRA6Q9BX79 667 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ST6GALNAC4Q9H4F1 302 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM206Q9H813 350 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ZMAT3Q9HA38 289 aaKnown RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM140Q9NV12 185 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 TRPM5Q9NZQ8 1165 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 BCCIPQ9P287 314 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 CHORDC1Q9UHD1 332 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 SIX4Q9UIU6 781 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 KNTC1P50748 2209 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 TSC2P49815 1807 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 ASPMQ8IZT6 3477 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 URB1O60287 2271 aaKnown RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 CABIN1Q9Y6J0 2220 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 DMXL2Q8TDJ6 3036 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TBC1D3BA6NDS4 549 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF840PA6NDX5 716 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 NPEPPSL1A6NEC2 478 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TAF4O00268 1085 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TEX33O43247 280 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 FRS3O43559 492 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 KAT7O95251 611 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 GCNT3O95395 438 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 NFATC1O95644 943 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 PLATP00750 562 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CFIP05156 583 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 IDEP14735 1019 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ENGP17813 658 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CSRP1P21291 193 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SCP2P22307 547 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 PCSK1P29120 753 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 PTPN7P35236 360 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 LONP1P36776 959 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 GNL1P36915 607 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 P2RY2P41231 377 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CACNA2D1P54289 1103 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SIM1P81133 766 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 MRPS21P82921 87 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 APBA1Q02410 837 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CEBPZQ03701 1054 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TLE1Q04724 770 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 KDSRQ06136 332 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 LMAN2Q12907 356 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TAF10Q12962 218 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SP140Q13342 867 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 MRPL49Q13405 166 aaKnown RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 RAB39AQ14964 217 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 POLD3Q15054 466 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CFAP221Q4G0U5 840 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 LY6G5CQ5SRR4 150 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 PRAMEF14Q5SWL7 426 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 DENND5BQ6ZUT9 1274 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF572Q7Z3I7 529 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SRLQ86TD4 932 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SYT12Q8IV01 421 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 ADGRF2Q8IZF7 708 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM86AQ8N2M4 240 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CHCHD4Q8N4Q1 142 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 OR5B17Q8NGF7 314 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CCDC26Q8TAB7 109 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 OLIG1Q8TAK6 271 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 MDM1Q8TC05 714 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CCHCR1Q8TD31 782 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 KBTBD7Q8WVZ9 684 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 DNAJC19Q96DA6 116 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 HPDLQ96IR7 371 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 TMX3Q96JJ7 454 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 PNKPQ96T60 521 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 SYT15Q9BQS2 421 aa5.44□□□□□ -1.54
PTCD3-219ENST00000494323 CBWD1Q9BRT8 395 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms