RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SMIM14Q96QK8 99 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 PSKH2Q96QS6 385 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 APOOQ9BUR5 198 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ATP13A3Q9H7F0 1226 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 NOD2Q9HC29 1040 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 DKK4Q9UBT3 224 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 APOBEC3BQ9UH17 382 aaKnown RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 CLCA2Q9UQC9 943 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 PCDHB1Q9Y5F3 818 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 PCDHGC4Q9Y5F7 938 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 ACACAQ13085 2346 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 NBEAQ8NFP9 2946 aa8.59□□□□□ -1.03
LRCH3-219ENST00000494069 URB1O60287 2271 aaKnown RBP8.59□□□□□ -1.03
LRCH3-219ENST00000494069 MYLKQ15746 1914 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 H3BM21 787 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 MYO1FO00160 1098 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 YY2O15391 372 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 MFSD11O43934 449 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 RECQL5O94762 991 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 ALPPL2P10696 532 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 CDK4P11802 303 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 CR2P20023 1033 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 TGM2P21980 687 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 SERPINA4P29622 427 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 HNRNPH3P31942 346 aaKnown RBP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 HNF1BP35680 557 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 SUOXP51687 545 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 ZNF135P52742 658 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 YPEL5P62699 121 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 E2F1Q01094 437 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 PPARDQ03181 441 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 TRAF2Q12933 501 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 PTK2BQ14289 1009 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 KRT81Q14533 505 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 RFTN1Q14699 578 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 GRM3Q14832 879 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 COL28A1Q2UY09 1125 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 HS1BP3Q53T59 392 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 CDCP2Q5VXM1 449 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 LIPIQ6XZB0 460 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 MACC1Q6ZN28 852 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 RFLNAQ6ZTI6 216 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 EFL1Q7Z2Z2 1120 aaKnown RBP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 RD3Q7Z3Z2 195 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 HID1Q8IV36 788 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 SFTPA2Q8IWL1 248 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 SLC35F3Q8IY50 421 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 LZTR1Q8N653 840 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 PAF1Q8N7H5 531 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 FAM181AQ8N9Y4 354 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 RNF214Q8ND24 703 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 PCDH19Q8TAB3 1148 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 ZNF564Q8TBZ8 553 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-219ENST00000494069 IFI44Q8TCB0 444 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 CHP1Q99653 195 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 C1QTNF7Q9BXJ2 289 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 SPASTQ9UBP0 616 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 B4GALT6Q9UBX8 382 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 AK5Q9Y6K8 562 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 CSNK1G3Q9Y6M4 447 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 ASXL3Q9C0F0 2248 aa8.58□□□□□ -1.04
LRCH3-219ENST00000494069 ANKRD36A6QL64 1941 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 EME2A4GXA9 379 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-219ENST00000494069 TMEM202A6NGA9 273 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 TMEM110-MUSTN1A8MSY1 372 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 HTRA2O43464 458 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-219ENST00000494069 PROSCO94903 275 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 ELFN1P0C7U0 828 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 LHCGRP22888 699 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 ITPKBP27987 946 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 RENBPP51606 427 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 HK3P52790 923 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 AP1S1P61966 158 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 DPYSL3Q14195 570 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 ZNF235Q14590 738 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 NFATC4Q14934 902 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 RTP5Q14D33 572 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 SLC18A3Q16572 532 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 DENND2CQ68D51 928 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 NCBP2-AS2Q69YL0 99 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 ZCCHC8Q6NZY4 707 aaKnown RBP8.57□□□□□ -1.04
LRCH3-219ENST00000494069 DPPA4Q7L190 304 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 HSD11B1LQ7Z5J1 315 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 ATPAF2Q8N5M1 289 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 PQLC3Q8N755 202 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 FAM71BQ8TC56 605 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 MAPK15Q8TD08 544 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 PDCD6IPQ8WUM4 868 aaKnown RBP8.57□□□□□ -1.04
LRCH3-219ENST00000494069 BTN2A2Q8WVV5 523 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 OR1E3Q8WZA6 343 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 RAPGEF5Q92565 580 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 NXPE2Q96DL1 559 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 IQCDQ96DY2 449 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 PDXPQ96GD0 296 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 ZNF599Q96NL3 588 aa8.57□□□□□ -1.04
LRCH3-219ENST00000494069 NUDCD1Q96RS6 583 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms