RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ATP8A1Q9Y2Q0 1164 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 A0A1W2PNU3 283 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 A0A1W2PQJ5 194 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 CACNB4O00305 520 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 TRAFD1O14545 582 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 YY2O15391 372 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 TCEA3O75764 348 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 TNFP01375 233 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 PCCBP05166 539 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 CD48P09326 243 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 ELFN1P0C7U0 828 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 RARAP10276 462 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 TSHRP16473 764 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 KELP23276 732 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 PCK1P35558 622 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 HSPA9P38646 679 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 LSSP48449 732 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 LIG3P49916 1009 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 SCNN1BP51168 640 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 HK3P52790 923 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 PCBP4P57723 403 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 AP1S1P61966 158 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 GABREP78334 506 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 MTM1Q13496 603 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 COL9A2Q14055 689 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 PIGHQ14442 188 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 INPP5AQ14642 412 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 NFATC4Q14934 902 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 AGERQ15109 404 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 TCEA2Q15560 299 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 DPYSL2Q16555 572 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 TMCO3Q6UWJ1 677 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 RD3Q7Z3Z2 195 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 HSPH1Q92598 858 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 ECHDC3Q96DC8 303 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 ZNF599Q96NL3 588 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 CSPG4P5Q96PW8 444 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 LGMNQ99538 433 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 APOOQ9BUR5 198 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 BOCQ9BWV1 1114 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 THSD1Q9NS62 852 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 GULP1Q9UBP9 304 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 KLQ9UEF7 1012 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 PADI4Q9UM07 663 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 OR1A2Q9Y585 309 aa13.47□□□□□ -0.25
CTDSP1-212ENST00000494067 CACNA1GO43497 2377 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 PMS2P1A4D2B8 440 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 PDE2AO00408 941 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 MPOP05164 745 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 CYP1A2P05177 515 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 CR2P20023 1033 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 TGM2P21980 687 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 IL4RP24394 825 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 ITPKBP27987 946 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 SERPINB6P35237 376 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 UBASH3AP57075 661 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 ERVPABLB-1P60509 514 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 SRP54P61011 504 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 MMRN1Q13201 1228 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 ZNF235Q14590 738 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 IHHQ14623 411 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 NFKBIBQ15653 356 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 ISXQ2M1V0 245 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 CRTC1Q6UUV9 634 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 OR6C4Q8NGE1 309 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 TSACCQ96A04 125 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 WDR92Q96MX6 357 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 UBL7Q96S82 380 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 PCDH18Q9HCL0 1135 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 CAPN11Q9UMQ6 739 aa13.46□□□□□ -0.25
CTDSP1-212ENST00000494067 FAM208BQ5VWN6 2430 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 A0A0U1RQS6 177 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 A8MX80 341 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 MAFKO60675 156 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 KRT10P13645 584 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 ARSEP51690 589 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 UCNP55089 124 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 SPIDRQ14159 915 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 SOWAHCQ53LP3 525 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 FAM182AQ5T1J6 154 aa13.45□□□□□ -0.26
CTDSP1-212ENST00000494067 SFTPA2Q8IWL1 248 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms