RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	SCIN	Q9Y6U3	715 aa		19	■□□□□ 0.63
ABCA2-222	ENST00000494046	TRPM6	Q9BX84	2022 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	DMXL2	Q8TDJ6	3036 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	PLXNB3	Q9ULL4	1909 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	GOLGA6L10	A0A0M3HER8	536 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046		A6NNZ2	444 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046		H3BQF6	201 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	TSPAN6	O43657	245 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	SPOP	O43791	374 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	PIGN	O95427	931 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	ERCC2	P18074	760 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	CTNNA1	P35221	906 aa	Known RBP	18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	PEX5	P50542	639 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	RAD51	Q06609	339 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	HSP90B2P	Q58FF3	399 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	SEL1L2	Q5TEA6	688 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	MAATS1	Q7Z4T9	603 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	SLC25A45	Q8N413	288 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	RAB7B	Q96AH8	199 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	PDF	Q9HBH1	243 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	KLHL11	Q9NVR0	708 aa		18.99	■□□□□ 0.63
ABCA2-222	ENST00000494046	BHMG1	C9JSJ3	638 aa	Predicted RBP	18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	TRIM38	O00635	465 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	TCF4	P15884	667 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	HTR7	P34969	479 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	CARS	P49589	748 aa	Known RBP	18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	NDST2	P52849	883 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	SMTNL2	Q2TAL5	461 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	ARHGAP36	Q6ZRI8	547 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	KRT35	Q92764	455 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	BTBD6	Q96KE9	485 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	KLF6	Q99612	283 aa	Predicted RBP	18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	NCAPG	Q9BPX3	1015 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	C1QTNF2	Q9BXJ5	285 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	DDX47	Q9H0S4	455 aa	Known RBP	18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	MRPL47	Q9HD33	250 aa	Known RBP	18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	MED4	Q9NPJ6	270 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	PCDHA3	Q9Y5H8	950 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	HS3ST3A1	Q9Y663	406 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	PTPRB	P23467	1997 aa		18.98	■□□□□ 0.63
ABCA2-222	ENST00000494046	SRRM3	A6NNA2	597 aa	Predicted RBP	18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	TAF4	O00268	1085 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	DFFA	O00273	331 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	FFAR2	O15552	330 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	PRAMEF11	O60813	436 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	MMP20	O60882	483 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	TIMP2	P16035	220 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	DGKA	P23743	735 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	IL1R2	P27930	398 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	ACADVL	P49748	655 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	ZNF211	Q13398	564 aa	Predicted RBP	18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	ARHGAP12	Q8IWW6	846 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	TP53INP2	Q8IXH6	220 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	GALNT15	Q8N3T1	639 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	NPW	Q8N729	165 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	MDM1	Q8TC05	714 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	FAM71B	Q8TC56	605 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	IFT81	Q8WYA0	676 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	DNAJC28	Q9NX36	388 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	CWC15	Q9P013	229 aa	Known RBP	18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	ANAPC7	Q9UJX3	599 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	MFHAS1	Q9Y4C4	1052 aa		18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	COL5A1	P20908	1838 aa	Predicted RBP	18.97	■□□□□ 0.63
ABCA2-222	ENST00000494046	ARHGAP42	A6NI28	874 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	AREL1	O15033	823 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	POLR3G	O15318	223 aa	Predicted RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	SIGLEC6	O43699	453 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	RFPL3	O75679	317 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	CAPNS1	P04632	268 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	RGR	P47804	291 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	CUL1	Q13616	776 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	SMAD1	Q15797	465 aa	Known RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	TPRG1L	Q5T0D9	272 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	KYAT3	Q6YP21	454 aa	Known RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	HSPH1	Q92598	858 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	WRAP53	Q9BUR4	548 aa	Known RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	ZWILCH	Q9H900	591 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	DONSON	Q9NYP3	566 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	RALY	Q9UKM9	306 aa	Known RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	NFU1	Q9UMS0	254 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	FPGT	O14772	594 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	PIAS2	O75928	621 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	SLC1A1	P43005	524 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	MARCKSL1	P49006	195 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	RWDD2B	P57060	319 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	PDE1C	Q14123	709 aa	Predicted RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	FZD2	Q14332	565 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	TERF2	Q15554	542 aa		18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	TSEN2	Q8NCE0	465 aa	Known RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	LENG8	Q96PV6	779 aa	Predicted RBP	18.96	■□□□□ 0.63
ABCA2-222	ENST00000494046	ESYT3	A0FGR9	886 aa		18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	XPA	P23025	273 aa	Predicted RBP	18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	SEMG2	Q02383	582 aa		18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	AFMID	Q63HM1	303 aa		18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	TXNRD3NB	Q6F5E7	133 aa		18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	CAMK1D	Q8IU85	385 aa		18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	CXorf40A	Q8TE69	158 aa		18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	CPEB1	Q9BZB8	566 aa	Known RBP	18.95	■□□□□ 0.62
ABCA2-222	ENST00000494046	CCDC86	Q9H6F5	360 aa	Known RBP	18.95	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms