RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 UNC5BQ8IZJ1 945 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS52-220ENST00000493674 LPCAT1Q8NF37 534 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 OR13J1Q8NGT2 312 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 SLC44A1Q8WWI5 657 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 PGM2Q96G03 612 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 CERS2Q96G23 380 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 MCCC1Q96RQ3 725 aaPredicted RBP12.72□□□□□ -0.37
VPS52-220ENST00000493674 RUFY1Q96T51 708 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 OSBPL1AQ9BXW6 950 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 SUV39H2Q9H5I1 410 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 ZDHHC6Q9H6R6 413 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 MAGEE1Q9HCI5 957 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 HACD3Q9P035 362 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 VPS18Q9P253 973 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 PLA2G4CQ9UP65 541 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 PCDHB9Q9Y5E1 797 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 PIAS3Q9Y6X2 628 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 CEP192Q8TEP8 1941 aa12.72□□□□□ -0.37
VPS52-220ENST00000493674 ANTXRLA6NF34 631 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 CAPN8A6NHC0 703 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 CXorf49A8MYA2 514 aaPredicted RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 RASGRF2O14827 1237 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 CDH16O75309 829 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 PRKCGP05129 697 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 SRFP11831 508 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 FAM193AP78312 1265 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 PFKPQ01813 784 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 MGAT5Q09328 741 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 IFFO1Q0D2I5 559 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 TDGQ13569 410 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 TAF1AQ15573 450 aaPredicted RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 KRT71Q3SY84 523 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 IER5LQ5T953 404 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 FSTL4Q6MZW2 842 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 CES3Q6UWW8 571 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 GDPD4Q6W3E5 623 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 MTERF4Q7Z6M4 381 aaKnown RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 CNTN4Q8IWV2 1026 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 GJD3Q8N144 294 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 RYBPQ8N488 228 aaPredicted RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 MDGA1Q8NFP4 955 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 DCAKDQ8WVC6 231 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 ARL8AQ96BM9 186 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 RMDN1Q96DB5 314 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 SMIM14Q96QK8 99 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 SRPK1Q96SB4 655 aaKnown RBP12.71□□□□□ -0.37
VPS52-220ENST00000493674 PAFAH2Q99487 392 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 CCDC77Q9BR77 488 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 MCMBPQ9BTE3 642 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 TRABDQ9H4I3 376 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.71□□□□□ -0.37
VPS52-220ENST00000493674 SLC2A6Q9UGQ3 507 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 IL36AQ9UHA7 158 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 PHTF1Q9UMS5 762 aa12.71□□□□□ -0.37
VPS52-220ENST00000493674 NUMA1Q14980 2115 aa12.71□□□□□ -0.38
VPS52-220ENST00000493674 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 AURKAO14965 403 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 NARSO43776 548 aaKnown RBP12.7□□□□□ -0.38
VPS52-220ENST00000493674 LEFTY1O75610 366 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 UGT2B4P06133 528 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 PIRTP0C851 137 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 MYZAPP0CAP1 466 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 HLA-EP13747 358 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 SLC8A1P32418 973 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 CAMK2GQ13555 558 aaPredicted RBP12.7□□□□□ -0.38
VPS52-220ENST00000493674 ELAVL3Q14576 367 aaKnown RBP12.7□□□□□ -0.38
VPS52-220ENST00000493674 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 ESRP1Q6NXG1 681 aaKnown RBP12.7□□□□□ -0.38
VPS52-220ENST00000493674 BRAT1Q6PJG6 821 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 SERPINA13PQ6UXR4 307 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 TMIEQ8NEW7 156 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 BLOC1S5Q8TDH9 187 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 STYXQ8WUJ0 223 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 TLCD1Q96CP7 247 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 FAM129BQ96TA1 746 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 ACOX2Q99424 681 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 HEBP1Q9NRV9 189 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 NLE1Q9NVX2 485 aaPredicted RBP12.7□□□□□ -0.38
VPS52-220ENST00000493674 GGT7Q9UJ14 662 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 ZNF180Q9UJW8 692 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 DUSP12Q9UNI6 340 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 ZNF711Q9Y462 761 aa12.7□□□□□ -0.38
VPS52-220ENST00000493674 GOLGA8KD6RF30 607 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 SLC7A4O43246 635 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 CRTAMO95727 393 aa12.69□□□□□ -0.38
VPS52-220ENST00000493674 EGFP01133 1207 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms