RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 WASHC5Q12768 1159 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 RALGDSQ12967 914 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 IHHQ14623 411 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 UAP1L1Q3KQV9 507 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 DARS2Q6PI48 645 aaKnown RBP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 USP45Q70EL2 814 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 OR2I1PQ8NGU4 316 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 ASB12Q8WXK4 309 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 IMP4Q96G21 291 aaKnown RBP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 TEKT5Q96M29 485 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 LENG8Q96PV6 779 aaPredicted RBP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 RBM15Q96T37 977 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 VAT1Q99536 393 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 TDRD1Q9BXT4 1180 aaKnown RBP12.85□□□□□ -0.35
CLIP2-209ENST00000493166 SLC25A51Q9H1U9 297 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 CARD9Q9H257 536 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 GLOD4Q9HC38 313 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 B4GALT6Q9UBX8 382 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 CHKBQ9Y259 395 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 COQ6Q9Y2Z9 468 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 SNX11Q9Y5W9 270 aa12.85□□□□□ -0.35
CLIP2-209ENST00000493166 LRP4O75096 1905 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 A6NNZ2 444 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 A8MX80 341 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 TLR4O00206 839 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 FPGTO14772 594 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 SLC30A4O14863 429 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 RAD51BO15315 384 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 FZD6O60353 706 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 OPHN1O60890 802 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 CYP2A6P11509 494 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-209ENST00000493166 CTPS1P17812 591 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 VIPR1P32241 457 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 CTSKP43235 329 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 CLDN2P57739 230 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 OVGP1Q12889 678 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 KLF1Q13351 362 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-209ENST00000493166 HLA-BQ31612 363 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 GCNT7Q6ZNI0 430 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 PID1Q7Z2X4 250 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 PTAR1Q7Z6K3 402 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-209ENST00000493166 IQCHQ86VS3 1027 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 REXO1L1PQ8IX06 675 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 DENND6BQ8NEG7 585 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 LPCAT1Q8NF37 534 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 FAM174AQ8TBP5 190 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 PIH1D2Q8WWB5 315 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 RMDN1Q96DB5 314 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 KLHDC7BQ96G42 594 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 C10orf88Q9H8K7 445 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 GDF3Q9NR23 364 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
CLIP2-209ENST00000493166 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 HS3ST3A1Q9Y663 406 aa12.84□□□□□ -0.35
CLIP2-209ENST00000493166 TCRBV7S2A1N4TA0A589 114 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 CFAP69A5D8W1 941 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 NPIPB15A6NHN6 443 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 H0Y8X5 98 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 KCNN4O15554 427 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 ZNF189O75820 626 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 MT-CYBP00156 380 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 ALPIP09923 528 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 THEGLP0DJG4 465 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 NFKB1P19838 968 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 NXPH1P58417 271 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 ARHGEF7Q14155 803 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 SLC14A2Q15849 920 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 PCSK7Q16549 785 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 LIPIQ6XZB0 460 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 KYAT3Q6YP21 454 aaKnown RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 SLC13A5Q86YT5 568 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 SPATA22Q8NHS9 363 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 IFT43Q96FT9 208 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 SCRN2Q96FV2 425 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 KLF6Q99612 283 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 RTKNQ9BST9 563 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 ADGRE3Q9BY15 652 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 IL21RQ9HBE5 538 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 DNAAF2Q9NVR5 837 aaKnown RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 RSPH14Q9UHP6 348 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 R3HDM2Q9Y2K5 976 aaKnown RBP12.83□□□□□ -0.36
CLIP2-209ENST00000493166 PPIL1Q9Y3C6 166 aa12.83□□□□□ -0.36
CLIP2-209ENST00000493166 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 MYLKQ15746 1914 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 A0A0J9YYE9 177 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 POM121BA6NF01 834 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 CAPN8A6NHC0 703 aa12.82□□□□□ -0.36
CLIP2-209ENST00000493166 F5H423 210 aaPredicted RBP12.82□□□□□ -0.36
CLIP2-209ENST00000493166 DFNA5O60443 496 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms