RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
PTPN7-216ENST00000492977 MRNIPQ6NTE8 343 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 CNSTQ6PJW8 725 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 C10orf107Q8IVU9 208 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 MFSD6LQ8IWD5 586 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 GPATCH11Q8N954 259 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 TTC16Q8NEE8 873 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 SH3RF2Q8TEC5 729 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 SCG3Q8WXD2 468 aaKnown RBP14.1□□□□□ -0.15
PTPN7-216ENST00000492977 TSPAN17Q96FV3 270 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 DNAJC1Q96KC8 554 aaKnown RBP14.1□□□□□ -0.15
PTPN7-216ENST00000492977 TBATAQ96M53 351 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 OMDQ99983 421 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 KCNK13Q9HB14 408 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 FBXO6Q9NRD1 293 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-216ENST00000492977 NLE1Q9NVX2 485 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-216ENST00000492977 ZMYM5Q9UJ78 669 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 DCTN4Q9UJW0 460 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 PCDHGC4Q9Y5F7 938 aa14.1□□□□□ -0.15
PTPN7-216ENST00000492977 ANKRD66B4E2M5 251 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 G3V2L1 256 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CD3EAPO15446 510 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 PHGDHO43175 533 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CLASP2O75122 1294 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 H2AFYO75367 372 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 MOSPD3O75425 235 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 RFPL2O75678 378 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 DNAJC8O75937 253 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 GOT2P00505 430 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 RHOP08100 348 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 RALBP11234 206 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 HOXB8P17481 243 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 GMPRP36959 345 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 SLC1A6P48664 564 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CSNK1DP48730 415 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 ZNF140P52738 457 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 PRKAA2P54646 552 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TAS2R39P59534 338 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 AP1S1P61966 158 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CAMK1Q14012 370 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TSNAXIP1Q2TAA8 658 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TPGS1Q6ZTW0 290 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CEP97Q8IW35 865 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 APCDD1Q8J025 514 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 OR6Y1Q8NGX8 325 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 PPM1EQ8WY54 764 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 BHMTQ93088 406 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TCEAL4Q96EI5 215 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 SIKE1Q9BRV8 207 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 KCNK4Q9NYG8 393 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 HACD3Q9P035 362 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 DPP7Q9UHL4 492 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CORO1CQ9ULV4 474 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 RUVBL2Q9Y230 463 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 ANKRD36A6QL64 1941 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 A0A0G2JND7 137 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CCDC162PA2VCL2 907 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 AURKAO14965 403 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 GRM6O15303 877 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CSPG5O95196 566 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 KLHL2O95198 593 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 PDHA1P08559 390 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 POU2F2P09086 479 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 PIRTP0C851 137 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 OGNP20774 298 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 MAPK8P45983 427 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 KPNA2P52292 529 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 LMAN2Q12907 356 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TRAF2Q12933 501 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TEAD2Q15562 447 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 ZCCHC23Q6ZST2 131 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 SDCCAG8Q86SQ7 713 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TNS4Q8IZW8 715 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CENPLQ8N0S6 344 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 LPCAT1Q8NF37 534 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 OR4L1Q8NH43 312 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CDKN2AIPNLQ96HQ2 116 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TMEM120AQ9BXJ8 343 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 SMG9Q9H0W8 520 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 ABCB8Q9NUT2 735 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 TDP1Q9NUW8 608 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 FCF1Q9Y324 198 aaKnown RBP14.09□□□□□ -0.15
PTPN7-216ENST00000492977 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 SPO11Q9Y5K1 396 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 CAPN7Q9Y6W3 813 aa14.09□□□□□ -0.15
PTPN7-216ENST00000492977 DOCK6Q96HP0 2047 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 OR51F1A6NGY5 319 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 CCL22O00626 93 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 FZD6O60353 706 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 TRIM13O60858 407 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 ATP5HO75947 161 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 MT-CO1P00395 513 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 MYL2P10916 166 aa14.08□□□□□ -0.16
PTPN7-216ENST00000492977 LPOP22079 712 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-216ENST00000492977 IRS1P35568 1242 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms