RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 CCR5P51681 352 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ZNF131P52739 623 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 HILS1P60008 231 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ARF3P61204 181 aaPredicted RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 ARF1P84077 181 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 BNC1Q01954 994 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SCARB2Q14108 478 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 BECN1Q14457 450 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TSTQ16762 297 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 GALNTL6Q49A17 601 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TTC31Q49AM3 519 aaPredicted RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 EFHC1Q5JVL4 640 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 CCDC158Q5M9N0 1113 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SULT6B1Q6IMI4 303 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TYW3Q6IPR3 259 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 ACAD10Q6JQN1 1059 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 KLHL17Q6TDP4 642 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 GALNTL5Q7Z4T8 443 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 BRSK2Q8IWQ3 736 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 CEP57L1Q8IYX8 460 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ARL6IP6Q8N6S5 226 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TEX9Q8N6V9 391 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TEX45Q8NA69 505 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 OR8H1Q8NGG4 311 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 LILRB1Q8NHL6 650 aaPredicted RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 SLC2A12Q8TD20 617 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 CREB3L4Q8TEY5 395 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ST8SIA4Q92187 359 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SNX21Q969T3 373 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 TMEM18Q96B42 140 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 NSUN4Q96CB9 384 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 ADGRG7Q96K78 797 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SPATA17Q96L03 361 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SPAG5Q96R06 1193 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 CXorf56Q9H5V9 222 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 SLC22A11Q9NSA0 550 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 DIAPH3Q9NSV4 1193 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 MALT1Q9UDY8 824 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 ZHX1Q9UKY1 873 aaPredicted RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 AGO1Q9UL18 857 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 C19orf53Q9UNZ5 99 aaPredicted RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 DHDHQ9UQ10 334 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 OSGIN2Q9Y236 505 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 RCE1Q9Y256 329 aa3.45□□□□□ -1.86
VPS36-205ENST00000492650 RRP7AQ9Y3A4 280 aaKnown RBP3.45□□□□□ -1.86
VPS36-205ENST00000492650 SOS1Q07889 1333 aaPredicted RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 HTATSF1O43719 755 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 KIF1CO43896 1103 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 PTP4A3O75365 173 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 CBX6O95503 412 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 IGLV2-11P01706 119 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 F7P08709 466 aaPredicted RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 ATP6V1B1P15313 513 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 IL11P20809 199 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 CST5P28325 142 aaPredicted RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 PEX5P50542 639 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 RPS6KA3P51812 740 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 AP2B1P63010 937 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 CHRNDQ07001 517 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 PKN2Q16513 984 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 LRRC24Q50LG9 513 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 RPUSD3Q6P087 351 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 AADACL2Q6P093 401 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 GALNT7Q86SF2 657 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 LCA5Q86VQ0 697 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 IQCA1Q86XH1 822 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 SLC44A2Q8IWA5 706 aaPredicted RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 MUC20Q8N307 709 aaPredicted RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 CARNMT1Q8N4J0 409 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 NGEFQ8N5V2 710 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 SCAIQ8N9R8 606 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 NEXN-AS1Q8NBZ9 246 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 CEP70Q8NHQ1 597 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 SCAMP5Q8TAC9 235 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 THAP4Q8WY91 577 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 TEFMQ96QE5 360 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 EPYCQ99645 322 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 NCAPGQ9BPX3 1015 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 DONSONQ9NYP3 566 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 NDUFAF4Q9P032 175 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 EPS15L1Q9UBC2 864 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 HERC5Q9UII4 1024 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 PA2G4Q9UQ80 394 aaKnown RBP3.44□□□□□ -1.86
VPS36-205ENST00000492650 ZNF711Q9Y462 761 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 PASKQ96RG2 1323 aa3.44□□□□□ -1.86
VPS36-205ENST00000492650 WDR81Q562E7 1941 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 A0A1B0GVM2 712 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 TARSL2A2RTX5 802 aaKnown RBP3.43□□□□□ -1.86
VPS36-205ENST00000492650 STRNO43815 780 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 SCGB1D1O95968 90 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 TFRCP02786 760 aaKnown RBP3.43□□□□□ -1.86
VPS36-205ENST00000492650 UMODP07911 640 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 CHN1P15882 459 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 PORP16435 677 aaPredicted RBP3.43□□□□□ -1.86
VPS36-205ENST00000492650 TNNT3P45378 269 aaPredicted RBP3.43□□□□□ -1.86
VPS36-205ENST00000492650 MXI1P50539 228 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 IFI35P80217 286 aaPredicted RBP3.43□□□□□ -1.86
VPS36-205ENST00000492650 CALD1Q05682 793 aaKnown RBP3.43□□□□□ -1.86
VPS36-205ENST00000492650 ACSM2AQ08AH3 577 aa3.43□□□□□ -1.86
VPS36-205ENST00000492650 SLC12A1Q13621 1099 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms