RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 DOCK4Q8N1I0 1966 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PTPRQQ9UMZ3 2332 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 LGALS16A8MUM7 142 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 CACNB4O00305 520 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 PLD2O14939 933 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 EPHB6O15197 1021 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 NVLO15381 856 aaKnown RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ZW10O43264 779 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 CREB3O43889 395 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 TNFSF15O95150 251 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 C6P13671 934 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 GLB1P16278 677 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 FERP16591 822 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 NFKBIAP25963 317 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 SERPINA4P29622 427 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 MMP12P39900 470 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 LIG3P49916 1009 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 RENBPP51606 427 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 PDX1P52945 283 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 COPB1P53618 953 aaKnown RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 INHBCP55103 352 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 PEX6Q13608 980 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 INPP5AQ14642 412 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ALG11Q2TAA5 492 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 CFAP58Q5T655 872 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ARHGAP40Q5TG30 622 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 AFMIDQ63HM1 303 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 DCUN1D2Q6PH85 259 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ENPP7Q6UWV6 458 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 DNAJC14Q6Y2X3 702 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 LEKR1Q6ZMV7 388 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 CCDC81Q6ZN84 652 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 SRLQ86TD4 932 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 HID1Q8IV36 788 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 MCOLN2Q8IZK6 566 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 PYROXD2Q8N2H3 581 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 FBXO39Q8N4B4 442 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 LZTR1Q8N653 840 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 GPR156Q8NFN8 814 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ECHDC3Q96DC8 303 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 MED8Q96G25 268 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 NAF1Q96HR8 494 aaKnown RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ZNF599Q96NL3 588 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 CCNL2Q96S94 520 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 WRAP53Q9BUR4 548 aaKnown RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 KLC2Q9H0B6 622 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 CPNE5Q9HCH3 593 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 PARVAQ9NVD7 372 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 FANCLQ9NW38 375 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 KLQ9UEF7 1012 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-212ENST00000492407 GPR34Q9UPC5 381 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 MYLKQ15746 1914 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 TRPM6Q9BX84 2022 aa9.19□□□□□ -0.94
HDAC3-212ENST00000492407 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 B8ZZF3 427 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 D6RAR5 112 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 J3QKU1 62 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 NUDT21O43809 227 aaKnown RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 BUB1BO60566 1050 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 PALMO75781 387 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 GJB6O95452 261 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 ITGB2P05107 769 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 ATP1A3P13637 1013 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 TEAD1P28347 426 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 HSPA9P38646 679 aaKnown RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 KLK7P49862 253 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 TPI1P60174 286 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 AP1S1P61966 158 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 RPL7AP62424 266 aaKnown RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 MYL5Q02045 173 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 ZFP36L1Q07352 338 aaKnown RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 BCL2L1Q07817 233 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 IL10RBQ08334 325 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 CLN3Q13286 438 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 RALGPS1Q5JS13 557 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 ERMARDQ5T6L9 678 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 PLEKHA7Q6IQ23 1121 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 DPPA4Q7L190 304 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 RAB11FIP2Q7L804 512 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 PHLDB2Q86SQ0 1253 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 OR56A4Q8NGH8 313 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 PCDH19Q8TAB3 1148 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 CHD5Q8TDI0 1954 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 FNIP1Q8TF40 1166 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 CCDC74AQ96AQ1 378 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-212ENST00000492407 MCEEQ96PE7 176 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 PSKH2Q96QS6 385 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 LRRN3Q9H3W5 708 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 CAAP1Q9H8G2 361 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 ANO10Q9NW15 660 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 GULP1Q9UBP9 304 aa9.18□□□□□ -0.94
HDAC3-212ENST00000492407 A0A1W2PQM1 296 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 KLHL33A6NCF5 533 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 J3KR12 359 aa9.17□□□□□ -0.94
HDAC3-212ENST00000492407 EEF2KO00418 725 aaKnown RBP9.17□□□□□ -0.94
HDAC3-212ENST00000492407 TRAFD1O14545 582 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms