RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CCDC106Q9BWC9 280 aa22.94■■□□□ 1.26
USF3-203ENST00000491165 BBS2Q9BXC9 721 aa22.94■■□□□ 1.26
USF3-203ENST00000491165 LIMD1Q9UGP4 676 aa22.94■■□□□ 1.26
USF3-203ENST00000491165 TYRP14679 529 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 GAB4Q2WGN9 574 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 DNAL1Q4LDG9 190 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 STEAP4Q687X5 459 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 CHST9Q7L1S5 443 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 C12orf40Q86WS4 652 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 PPFIBP2Q8ND30 876 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 PPP1R14CQ8TAE6 165 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 HMCESQ96FZ2 354 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 SIKE1Q9BRV8 207 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 TBC1D30Q9Y2I9 924 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 ARNTLO00327 626 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 SLC9A3R1O14745 358 aaPredicted RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 SERPINA6P08185 405 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 ACVRL1P37023 503 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 ALDH18A1P54886 795 aaKnown RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 KDSRQ06136 332 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 AP1B1Q10567 949 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 ASTLQ6HA08 431 aaPredicted RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 ZCCHC23Q6ZST2 131 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 MARK2Q7KZI7 788 aaKnown RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 NET1Q7Z628 596 aaPredicted RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 SCUBE1Q8IWY4 988 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 NAT16Q8N8M0 369 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 FBXO27Q8NI29 283 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 ACMSDQ8TDX5 336 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 TFB1MQ8WVM0 346 aaKnown RBP22.93■■□□□ 1.26
USF3-203ENST00000491165 CHFRQ96EP1 664 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 PLA2G4CQ9UP65 541 aa22.93■■□□□ 1.26
USF3-203ENST00000491165 DFFAO00273 331 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 CIB2O75838 187 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 ALDH1A2O94788 518 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 TOP3BO95985 862 aaKnown RBP22.92■■□□□ 1.26
USF3-203ENST00000491165 LINGO3P0C6S8 592 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 MLNP12872 115 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 GDI1P31150 447 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 SERPINB6P35237 376 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 FDFT1P37268 417 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 MESP2Q0VG99 397 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 AAK1Q2M2I8 961 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 FASTKD1Q53R41 847 aaKnown RBP22.92■■□□□ 1.26
USF3-203ENST00000491165 MPP7Q5T2T1 576 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 C6orf163Q5TEZ5 329 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 NAIF1Q69YI7 327 aaPredicted RBP22.92■■□□□ 1.26
USF3-203ENST00000491165 IRGCQ6NXR0 463 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 MFN1Q8IWA4 741 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 KIAA1958Q8N8K9 716 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 HTR3CQ8WXA8 447 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 FAM136AQ96C01 138 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 KCNK12Q9HB15 430 aa22.92■■□□□ 1.26
USF3-203ENST00000491165 H0Y626 953 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 TM7SF2O76062 418 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 ASGR2P07307 311 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 MZF1P28698 734 aaPredicted RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 MAPKAPK2P49137 400 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 GALNT2Q10471 571 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 LBRQ14739 615 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 CASC4Q6P4E1 433 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 MTSS1LQ765P7 747 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 OR7D4Q8NG98 312 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 CDKL2Q92772 493 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 MARK1Q9P0L2 795 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 A0A0A0MRY4 1105 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 TYW5A2RUC4 315 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 DPPA5A6NC42 116 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 HACD1B0YJ81 288 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 RAMP2O60895 175 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 VAV1P15498 845 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 GLDCP23378 1020 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 HLA-FP30511 346 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 GARSP41250 739 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 PAPOLAP51003 745 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 IRX4P78413 519 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 ZNF177Q13360 481 aaPredicted RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 CDH18Q13634 790 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 TRMT5Q32P41 509 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 WDR75Q8IWA0 830 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 SPATA13Q96N96 652 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 TRMT61BQ9BVS5 477 aaKnown RBP22.91■■□□□ 1.26
USF3-203ENST00000491165 PRDM16Q9HAZ2 1276 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 ANGPTL2Q9UKU9 493 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 SORCS3Q9UPU3 1222 aa22.91■■□□□ 1.26
USF3-203ENST00000491165 SDR42E2A6NKP2 422 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 GLRA3O75311 464 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 CYBBP04839 570 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 CD70P32970 193 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 NIPAL4Q0D2K0 466 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 POLD3Q15054 466 aaPredicted RBP22.9■■□□□ 1.26
USF3-203ENST00000491165 ULK2Q8IYT8 1036 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 LZTR1Q8N653 840 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 ZNF419Q96HQ0 510 aaPredicted RBP22.9■■□□□ 1.26
USF3-203ENST00000491165 THG1LQ9NWX6 298 aaKnown RBP22.9■■□□□ 1.26
USF3-203ENST00000491165 ACTL7AQ9Y615 435 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 COL4A2P08572 1712 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 KIAA1549LQ6ZVL6 1849 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms