RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RANBP9Q96S59 729 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 FAM126AQ9BYI3 521 aaPredicted RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 UNKQ9C0B0 810 aaKnown RBP7.38□□□□□ -1.23
NPHP3-208ENST00000490993 OXSMQ9NWU1 459 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 IL1RAPL1Q9NZN1 696 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 PDP2Q9P2J9 529 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 DTNAQ9Y4J8 743 aa7.38□□□□□ -1.23
NPHP3-208ENST00000490993 NCF1BA6NI72 391 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NCF1CA8MVU1 366 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MEI4A8MW99 385 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ADAMTS4O75173 837 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 EPOP01588 193 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NCF1P14598 390 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ABL2P42684 1182 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 CCNG1P51959 295 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ATP6AP1LQ52LC2 224 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 GRAMD4Q6IC98 578 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PRSS55Q6UWB4 352 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 FAM13CQ8NE31 585 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NXNL1Q96CM4 212 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 SPDL1Q96EA4 605 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MAGEB10Q96LZ2 347 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 WDR6Q9NNW5 1121 aaKnown RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MAFFQ9ULX9 164 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NDUFAF1Q9Y375 327 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 RAI2Q9Y5P3 530 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MRPL42Q9Y6G3 142 aaKnown RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ABHD14A-ACY1A0A1B0GW23 586 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PRR5-ARHGAP8B1AHC4 643 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PITPNM1O00562 1244 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 KPNA5O15131 536 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 C1RP00736 705 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 SLC1A2P43004 574 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 IRX1P78414 480 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ARHGAP8P85298 464 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 DSC3Q14574 896 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PTPRNQ16849 979 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 SAMD4BQ5PRF9 694 aaKnown RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ADAMTSL2Q86TH1 951 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ZC3HC1Q86WB0 502 aaKnown RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 KLHDC9Q8NEP7 349 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NT5C3BQ969T7 300 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MYO19Q96H55 970 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 IL12RB2Q99665 862 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 SH3GL1Q99961 368 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 HGH1Q9BTY7 390 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 LRCH1Q9Y2L9 728 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 C15orf38-AP3S2A0A0A6YYH1 394 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 SIN3BO75182 1162 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 TM7SF2O76062 418 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PSMA4P25789 261 aaKnown RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MC4RP32245 332 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 IDH3AP50213 366 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PFKFB4Q16877 469 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ERAP2Q6P179 960 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ARPINQ7Z6K5 226 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ULK2Q8IYT8 1036 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 UNC5BQ8IZJ1 945 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM209Q96SK2 561 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 CCT7Q99832 543 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 OMDQ99983 421 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 AP3M1Q9Y2T2 418 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 USP3Q9Y6I4 520 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MEIS3P2A8K0S8 358 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MRASO14807 208 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 KATNA1O75449 491 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 OAS1P00973 400 aaKnown RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 KRT6AP02538 564 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 KRT6BP04259 564 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 FCGR1AP12314 374 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 CYP2A7P20853 494 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PIK3R1P27986 724 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 KRT6CP48668 564 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 MGAT3Q09327 533 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 SERINC3Q13530 473 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 ADGRF1Q5T601 910 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 RFWD3Q6PCD5 774 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 CUZD1Q86UP6 607 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 RBFAQ8N0V3 343 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 FSTL5Q8N475 847 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 TRIML2Q8N7C3 387 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 PAAF1Q9BRP4 392 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 GATA5Q9BWX5 397 aaPredicted RBP7.37□□□□□ -1.23
NPHP3-208ENST00000490993 TRIM4Q9C037 500 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 WDR41Q9HAD4 459 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 NMRK1Q9NWW6 199 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 RNF186Q9NXI6 227 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 AURKCQ9UQB9 309 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 FAM50BQ9Y247 325 aa7.37□□□□□ -1.23
NPHP3-208ENST00000490993 WASH4PA8MWX3 477 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 QSOX1O00391 747 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 NR5A2O00482 541 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 AKAP10O43572 662 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 PRAMEF11O60813 436 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 SNRPB2P08579 225 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 POLR2EP19388 210 aaKnown RBP7.36□□□□□ -1.23
NPHP3-208ENST00000490993 CACNG1Q06432 222 aa7.36□□□□□ -1.23
NPHP3-208ENST00000490993 TRIM32Q13049 653 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms