RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 AGERQ15109 404 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 UGP2Q16851 508 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 ISXQ2M1V0 245 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 SMTNL2Q2TAL5 461 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 TMEM52BQ4KMG9 183 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 ATP13A4Q4VNC1 1196 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 BOLA3Q53S33 107 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 PRRT3Q5FWE3 981 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 PPP6R3Q5H9R7 873 aaPredicted RBP10.45□□□□□ -0.74
TTC28-207ENST00000490475 C6orf132Q5T0Z8 1188 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 FAXCQ5TGI0 409 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 PHACTR4Q8IZ21 702 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 NIPA2Q8N8Q9 360 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 OR6K2Q8NGY2 324 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 HSPH1Q92598 858 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 WBP1Q96G27 269 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 FCRL3Q96P31 734 aaPredicted RBP10.45□□□□□ -0.74
TTC28-207ENST00000490475 BOCQ9BWV1 1114 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 SUV39H2Q9H5I1 410 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 ATP13A3Q9H7F0 1226 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 UVRAGQ9P2Y5 699 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 PCDHGA8Q9Y5G5 932 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 BPTFQ12830 3046 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 RP1P56715 2156 aa10.45□□□□□ -0.74
TTC28-207ENST00000490475 TSPAN11A1L157 253 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 CPED1A4D0V7 1026 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 RNF103O00237 685 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 EEF2KO00418 725 aaKnown RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 DAPK3O43293 454 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 MMP20O60882 483 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 NEBLO76041 1014 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 PROSCO94903 275 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 RASGRP1O95267 797 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 LCA5LO95447 670 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 RARAP10276 462 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 CTSEP14091 401 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 HK3P52790 923 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 CLDN6P56747 220 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 RHDQ02161 417 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 TLE3Q04726 772 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 NSUN2Q08J23 767 aaKnown RBP eCLIP10.44□□□□□ -0.74
TTC28-207ENST00000490475 EIF2B5Q13144 721 aaKnown RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 EIF3IQ13347 325 aaKnown RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 MTM1Q13496 603 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 MESDQ14696 234 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 CDKN3Q16667 212 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 ATXN7L2Q5T6C5 722 aaPredicted RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 RAD9BQ6WBX8 426 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 LEKR1Q6ZMV7 388 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 EFL1Q7Z2Z2 1120 aaKnown RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 GKN2Q86XP6 184 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 TMTC1Q8IUR5 882 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 SPACA3Q8IXA5 215 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 CCDC170Q8IYT3 715 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 ARL14Q8N4G2 192 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 LZTR1Q8N653 840 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 PAF1Q8N7H5 531 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 NETO2Q8NC67 525 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 HMCESQ96FZ2 354 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 HIC2Q96JB3 615 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 NOL6Q9H6R4 1146 aaKnown RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 CWC15Q9P013 229 aaKnown RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 PCDHA13Q9Y5I0 950 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 ACTL7AQ9Y615 435 aa10.44□□□□□ -0.74
TTC28-207ENST00000490475 EPN1Q9Y6I3 576 aaPredicted RBP10.44□□□□□ -0.74
TTC28-207ENST00000490475 LY6G6EA0A0G2JKS1 128 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ERVH48-1M5A8F1 160 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 PDE2AO00408 941 aaPredicted RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ZW10O43264 779 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 SPINT1O43278 529 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 PRAMEF11O60813 436 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 PALMO75781 387 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 MPOP05164 745 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 TIMP2P16035 220 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ERCC2P18074 760 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 FECHP22830 423 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ITPKBP27987 946 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 GKP32189 559 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 CYLC1P35663 651 aaPredicted RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 IGFALSP35858 605 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 HSPA9P38646 679 aaKnown RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 HCAR3P49019 387 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 TAS2R40P59535 323 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 SLC25A11Q02978 314 aaKnown RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 PEX6Q13608 980 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 SPIDRQ14159 915 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 NFATC4Q14934 902 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 SPA17Q15506 151 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 DEFB133Q30KQ1 61 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 RFX8Q6ZV50 586 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 BBS5Q8N3I7 341 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 ARL10Q8N8L6 244 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 TP53I13Q8NBR0 393 aaPredicted RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 WDR36Q8NI36 951 aaKnown RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 KCNE4Q8WWG9 221 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
TTC28-207ENST00000490475 CELF6Q96J87 481 aaKnown RBP10.43□□□□□ -0.74
TTC28-207ENST00000490475 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms