RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 PCDH12Q9NPG4 1184 aa11.42□□□□□ -0.58
CDCP1-203ENST00000490471 LHX3Q9UBR4 397 aa11.42□□□□□ -0.58
CDCP1-203ENST00000490471 DNPEPQ9ULA0 475 aa11.42□□□□□ -0.58
CDCP1-203ENST00000490471 GPR34Q9UPC5 381 aa11.42□□□□□ -0.58
CDCP1-203ENST00000490471 PCDHGA8Q9Y5G5 932 aa11.42□□□□□ -0.58
CDCP1-203ENST00000490471 URB1O60287 2271 aaKnown RBP11.42□□□□□ -0.58
CDCP1-203ENST00000490471 KNTC1P50748 2209 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 RNF103O00237 685 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 ATXN7O15265 892 aaPredicted RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 TLX3O43711 291 aaPredicted RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 SOCS5O75159 536 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 PIGNO95427 931 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 PCCBP05166 539 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 PYGLP06737 847 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 CES1P23141 567 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 MIPP30301 263 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 CLDN6P56747 220 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 KIAA1024LP59773 190 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 CXADRP78310 365 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 ACOX1Q15067 660 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 WSCD2Q2TBF2 565 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 TAF1BQ53T94 588 aaPredicted RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 C3orf38Q5JPI3 329 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 GUSBP11Q6P575 273 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 TAF8Q7Z7C8 310 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 ZNF454Q8N9F8 522 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 OR56A4Q8NGH8 313 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 WBP1Q96G27 269 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 CELF6Q96J87 481 aaKnown RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 EXOC2Q96KP1 924 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 PSKH2Q96QS6 385 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 CCDC3Q9BQI4 270 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 SNRNP25Q9BV90 132 aaKnown RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 LRRC61Q9BV99 259 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 MBNL1Q9NR56 388 aaKnown RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 PHPT1Q9NRX4 125 aaPredicted RBP11.41□□□□□ -0.58
CDCP1-203ENST00000490471 SEPT10Q9P0V9 454 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 MYO1AQ9UBC5 1043 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 GGT7Q9UJ14 662 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 MOSPD1Q9UJG1 213 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 PHTF1Q9UMS5 762 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 NEU3Q9UQ49 428 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 DGKBQ9Y6T7 804 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 USP24Q9UPU5 2620 aa11.41□□□□□ -0.58
CDCP1-203ENST00000490471 J3KR12 359 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 KLK10O43240 276 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 SPINT1O43278 529 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 PNLIPP16233 465 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 TGM2P21980 687 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 ITPKBP27987 946 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 MMP12P39900 470 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 CDH6P55285 790 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 KRT81Q14533 505 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 NCAPHQ15003 741 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 LRRC73Q5JTD7 316 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 CCDC122Q5T0U0 273 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 ARTNQ5T4W7 220 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 TMEM164Q5U3C3 297 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 MARC1Q5VT66 337 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 TIGD7Q6NT04 549 aaPredicted RBP11.4□□□□□ -0.58
CDCP1-203ENST00000490471 DPPA4Q7L190 304 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 CAMK1DQ8IU85 385 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 SPACA3Q8IXA5 215 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 RBFAQ8N0V3 343 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 TSEN2Q8NCE0 465 aaKnown RBP11.4□□□□□ -0.58
CDCP1-203ENST00000490471 SYN2Q92777 582 aaPredicted RBP11.4□□□□□ -0.58
CDCP1-203ENST00000490471 TSACCQ96A04 125 aaPredicted RBP11.4□□□□□ -0.58
CDCP1-203ENST00000490471 SLC46A1Q96NT5 459 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 MAGEB5Q9BZ81 275 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 WDR26Q9H7D7 661 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 PDFQ9HBH1 243 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 SATB2Q9UPW6 733 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 PCDHB1Q9Y5F3 818 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 FAM208BQ5VWN6 2430 aa11.4□□□□□ -0.58
CDCP1-203ENST00000490471 ERVH48-1M5A8F1 160 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 MYO1FO00160 1098 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 PSMD11O00231 422 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 INSIG1O15503 277 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 TEX33O43247 280 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 RECQL5O94762 991 aaPredicted RBP11.39□□□□□ -0.59
CDCP1-203ENST00000490471 JMJD7P0C870 316 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 GLB1P16278 677 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 SSR1P43307 286 aaKnown RBP11.39□□□□□ -0.59
CDCP1-203ENST00000490471 INHBCP55103 352 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 ILF3Q12906 894 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDCP1-203ENST00000490471 CLPPQ16740 277 aaPredicted RBP11.39□□□□□ -0.59
CDCP1-203ENST00000490471 AFMIDQ63HM1 303 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 FOXR1Q6PIV2 292 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 LIPIQ6XZB0 460 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 USP45Q70EL2 814 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 SLC35F3Q8IY50 421 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 FBXO39Q8N4B4 442 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 FAM46DQ8NEK8 389 aa11.39□□□□□ -0.59
CDCP1-203ENST00000490471 PDCD6IPQ8WUM4 868 aaKnown RBP11.39□□□□□ -0.59
CDCP1-203ENST00000490471 TEKT4Q8WW24 435 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms