RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 RALGDSQ12967 914 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 TMEM52BQ4KMG9 183 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 KCTD11Q693B1 232 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 DPPA4Q7L190 304 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 TSPAN33Q86UF1 283 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 KLHDC8BQ8IXV7 354 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 PDCD7Q8N8D1 485 aaKnown RBP16.81■□□□□ 0.28
SFXN5-220ENST00000490056 SPATA4Q8NEY3 305 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 SCRN2Q96FV2 425 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 FEM1CQ96JP0 617 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 FSD1LQ9BXM9 530 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 ADGRE3Q9BY15 652 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 EBF2Q9HAK2 575 aa16.81■□□□□ 0.28
SFXN5-220ENST00000490056 RPL26L1Q9UNX3 145 aaKnown RBP16.81■□□□□ 0.28
SFXN5-220ENST00000490056 AAR2Q9Y312 384 aaKnown RBP16.81■□□□□ 0.28
SFXN5-220ENST00000490056 ARIH1Q9Y4X5 557 aaPredicted RBP16.81■□□□□ 0.28
SFXN5-220ENST00000490056 A0A0J9YYE9 177 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 GOLGA8CPA6NN73 597 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 MEI4A8MW99 385 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 ESPNB1AK53 854 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 CCDC188H7C350 402 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 ECEL1O95672 775 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 TRBC1P01850 177 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 ATXN1LP0C7T5 689 aaKnown RBP16.8■□□□□ 0.28
SFXN5-220ENST00000490056 ITPKAP23677 461 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 VIPR1P32241 457 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 NBL1P41271 181 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 PTGIRP43119 386 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 LIG3P49916 1009 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 CCR5P51681 352 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 GPS1Q13098 491 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 SLC1A5Q15758 541 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 ZNF284Q2VY69 593 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 TMEM259Q4ZIN3 620 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 SIRPB2Q5JXA9 342 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 CCDC70Q6NSX1 233 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 NEK5Q6P3R8 708 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 CRTC1Q6UUV9 634 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 LIPIQ6XZB0 460 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 USP45Q70EL2 814 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 TRIM69Q86WT6 500 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 HORMAD1Q86X24 394 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 NDUFAF2Q8N183 169 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 CXorf40AQ8TE69 158 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 GRK7Q8WTQ7 553 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 FOXJ1Q92949 421 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 MCCC1Q96RQ3 725 aaPredicted RBP16.8■□□□□ 0.28
SFXN5-220ENST00000490056 PHOX2BQ99453 314 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 KRT12Q99456 494 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 PCYOX1Q9UHG3 505 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 FEZ2Q9UHY8 353 aaPredicted RBP16.8■□□□□ 0.28
SFXN5-220ENST00000490056 EIF2B4Q9UI10 523 aaKnown RBP16.8■□□□□ 0.28
SFXN5-220ENST00000490056 SMG5Q9UPR3 1016 aaKnown RBP16.8■□□□□ 0.28
SFXN5-220ENST00000490056 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.8■□□□□ 0.28
SFXN5-220ENST00000490056 COQ6Q9Y2Z9 468 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 MRFAP1Q9Y605 127 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 SLCO1B1Q9Y6L6 691 aa16.8■□□□□ 0.28
SFXN5-220ENST00000490056 LRRK1Q38SD2 2015 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 ATXN2Q99700 1313 aaKnown RBP16.79■□□□□ 0.28
SFXN5-220ENST00000490056 CAPN8A6NHC0 703 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 SLC31A1O15431 190 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 EPOP01588 193 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 CYP2A6P11509 494 aaPredicted RBP16.79■□□□□ 0.28
SFXN5-220ENST00000490056 LHCGRP22888 699 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 GRIA4P48058 902 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 RPS21P63220 83 aaKnown RBP16.79■□□□□ 0.28
SFXN5-220ENST00000490056 MRPS25P82663 173 aaKnown RBP16.79■□□□□ 0.28
SFXN5-220ENST00000490056 SEMA5AQ13591 1074 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 FGL2Q14314 439 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 CNGA3Q16281 694 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 WHAMMP3Q1A5X7 153 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 SPDYCQ5MJ68 293 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 LYSMD4Q5XG99 296 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 DENND2CQ68D51 928 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 KIAA1161Q6NSJ0 714 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 RANBP10Q6VN20 620 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 RGL4Q8IZJ4 473 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 SUMF1Q8NBK3 374 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 PPP1R2P1Q96PQ5 205 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 TBL1YQ9BQ87 522 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 MIR1-1HGQ9H1L0 117 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 RAB23Q9ULC3 237 aa16.79■□□□□ 0.28
SFXN5-220ENST00000490056 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 GOLGA6BA6NDN3 693 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 E7EVH7 732 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 PSMD3O43242 534 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 LATO43561 262 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 ZNF500O60304 480 aaPredicted RBP16.78■□□□□ 0.28
SFXN5-220ENST00000490056 HEXIM1O94992 359 aaKnown RBP16.78■□□□□ 0.28
SFXN5-220ENST00000490056 CLDN7O95471 211 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 AP2A1O95782 977 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 GAS8O95995 478 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 C6P13671 934 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 TNNT3P45378 269 aaPredicted RBP16.78■□□□□ 0.28
SFXN5-220ENST00000490056 LMAN1P49257 510 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 BASP1P80723 227 aaKnown RBP16.78■□□□□ 0.28
SFXN5-220ENST00000490056 NHLH1Q02575 133 aa16.78■□□□□ 0.28
SFXN5-220ENST00000490056 PPP1R7Q15435 360 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms