RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GLRA3O75311 464 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 OR7A10O76100 309 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SLITRK5O94991 958 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 VAPBO95292 243 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PF4P02776 101 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 YES1P07947 543 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TRAPPC2P0DI81 140 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TRAPPC2BP0DI82 140 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 AKR1B1P15121 316 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TCN1P20061 433 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 IL10P22301 178 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 FGFR3P22607 806 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 GMPRP36959 345 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 HCAR3P49019 387 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PRIM2P49643 509 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ETV1P50549 477 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 VAMP7P51809 220 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ATXN3P54252 364 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ACTR2P61160 394 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PSMC6P62333 389 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RPL10AP62906 217 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ADARB1P78563 741 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 GHRHRQ02643 423 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CHRNDQ07001 517 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SMARCB1Q12824 385 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC13A2Q13183 592 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 MAMLD1Q13495 774 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 DPYSL3Q14195 570 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 MAPRE2Q15555 327 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 MAPK11Q15759 364 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ATP6AP1Q15904 470 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC9B1Q4ZJI4 515 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CYBRD1Q53TN4 286 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TFDP3Q5H9I0 405 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RBM48Q5RL73 367 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SHEQ5VZ18 495 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 DCUN1D2Q6PH85 259 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PRSS48Q7RTY5 328 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ADCK1Q86TW2 530 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 HORMAD1Q86X24 394 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF677Q86XU0 584 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RIOX2Q8IUF8 465 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 UBQLNLQ8IYU4 475 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 UNC5BQ8IZJ1 945 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SVOPQ8N4V2 548 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 MYCT1Q8N699 235 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RNF148Q8N7C7 305 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SHCBP1Q8NEM2 672 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RSAD2Q8WXG1 361 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 HERVK_113Q902F9 699 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CENPNQ96H22 339 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC45A3Q96JT2 553 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CEP170P1Q96L14 293 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RHOVQ96L33 236 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 KREMEN1Q96MU8 473 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 HHIPQ96QV1 700 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 PIGSQ96S52 555 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TM9SF2Q99805 663 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 MUC3BQ9H195 1237 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SERHL2Q9H4I8 314 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 RIOX1Q9H6W3 641 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 SPC25Q9HBM1 224 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TM9SF3Q9HD45 589 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ACOXLQ9NUZ1 547 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 ADPRHL2Q9NX46 363 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 WARS2Q9UGM6 360 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 CD300AQ9UGN4 299 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
SNRNP40-206ENST00000489853 TNS3Q68CZ2 1445 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CYP3A7-CYP3A51PA0A087WV96 503 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 LOC102724428A0A0B4J2F2 783 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 MAGEB16A2A368 324 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 HMX2A2RU54 273 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TCAF2A6NFQ2 919 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ATP6V1G2-DDX39BF2Z307 99 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 H0YC42 278 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 H0YIN7 160 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 INO80B-WBP1J3KQ70 363 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TRIM24O15164 1050 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CAPN5O15484 640 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 NOS1APO75052 506 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF254O75437 659 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TIPRLO75663 272 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM63AO94886 807 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SEC24AO95486 1093 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 APOA1P02647 267 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ALBP02768 609 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 KRT1P04264 644 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SPATA31C1P0DKV0 1188 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 DBTP11182 482 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 GFAPP14136 432 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SPNP16150 400 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CYP3A7P24462 503 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 FASP25445 335 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 HSD3B2P26439 372 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 RFC4P35249 363 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TALDO1P37837 337 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 HTR2BP41595 481 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms