RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 RALGDSQ12967 914 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 GRIK2Q13002 908 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 SLC14A1Q13336 389 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 CCDC6Q16204 474 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 TCEAL6Q6IPX3 200 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 DRICH1Q6PGQ1 229 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 DARS2Q6PI48 645 aaKnown RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ABI3BPQ7Z7G0 1075 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 PDCD6IPQ8WUM4 868 aaKnown RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 TCEAL3Q969E4 200 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 RTP4Q96DX8 246 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 PBKQ96KB5 322 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 SPATA13Q96N96 652 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 NAP1L3Q99457 506 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 KLF6Q99612 283 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 GBA3Q9H227 469 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 SMOC1Q9H4F8 434 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ERVMER34-1Q9H9K5 563 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 TMEM9BQ9NQ34 198 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 HOMER3Q9NSC5 361 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 B4GALT6Q9UBX8 382 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 GGT7Q9UJ14 662 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ANKRD6Q9Y2G4 727 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 CFAP54Q96N23 3096 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 TTC24A2A3L6 582 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 C5orf60A6NFR6 353 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 FPGTO14772 594 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 SLC31A1O15431 190 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 KCNN4O15554 427 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 HEXIM1O94992 359 aaKnown RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 PRLP01236 227 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 PRLRP16471 622 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 NFKB1P19838 968 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 STIP1P31948 543 aaKnown RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 CD68P34810 354 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 CTSKP43235 329 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 TNNT3P45378 269 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 RABIFP47224 123 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 CSNK1EP49674 416 aaKnown RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 LIG3P49916 1009 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 NXPH1P58417 271 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 FAM193AP78312 1265 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 MPP3Q13368 585 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 FGL2Q14314 439 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF423Q2M1K9 1284 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 LRRC73Q5JTD7 316 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF569Q5MCW4 686 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 LIPIQ6XZB0 460 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 GCNT7Q6ZNI0 430 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 PID1Q7Z2X4 250 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 KLHDC8BQ8IXV7 354 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 CENPTQ96BT3 561 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 LRRC45Q96CN5 670 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 IFT43Q96FT9 208 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 TRIB3Q96RU7 358 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 WRAP53Q9BUR4 548 aaKnown RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 CEP41Q9BYV8 373 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 USP29Q9HBJ7 922 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 GDF3Q9NR23 364 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 GPR27Q9NS67 375 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 FAM153AQ9UHL3 310 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 RSPH14Q9UHP6 348 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 AAR2Q9Y312 384 aaKnown RBP11.12□□□□□ -0.63
CPSF7-212ENST00000489728 PCDHGB2Q9Y5G2 931 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 SLCO1B1Q9Y6L6 691 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 GON4LQ3T8J9 2241 aa11.12□□□□□ -0.63
CPSF7-212ENST00000489728 DMXL1Q9Y485 3027 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 A0A1B0GVT2 93 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 TCRBV7S2A1N4TA0A589 114 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 GOLGA6CA6NDK9 693 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 GOLGA6BA6NDN3 693 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 NPIPB15A6NHN6 443 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 TLR4O00206 839 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CDX4O14627 284 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 SLC30A4O14863 429 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 LIASO43766 372 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 MMP20O60882 483 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 GCATO75600 419 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 NDST3O95803 873 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 PAK4O96013 591 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-212ENST00000489728 WNT1P04628 370 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 ITGAVP06756 1048 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 PDHA1P08559 390 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 GOLGA6DP0CG33 693 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 TEAD1P28347 426 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 GEMP55040 296 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 YPEL5P62699 121 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 BNC1Q01954 994 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 CDK18Q07002 472 aa11.11□□□□□ -0.63
CPSF7-212ENST00000489728 ARHGEF7Q14155 803 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms