RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 KCNS2Q9ULS6 477 aa3.07□□□□□ -1.92
CPSF3-205ENST00000489629 RRP7AQ9Y3A4 280 aaKnown RBP3.07□□□□□ -1.92
CPSF3-205ENST00000489629 GREB1LQ9C091 1923 aaPredicted RBP3.07□□□□□ -1.92
CPSF3-205ENST00000489629 C16orf97H3BN30 126 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 PEX12O00623 359 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 FGF17O60258 216 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 AMBPP02760 352 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 WEE2P0C1S8 567 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 HLA-DOBP13765 273 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 GM2AP17900 193 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 STX2P32856 288 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 CLCN3P51790 818 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 YWHAZP63104 245 aaKnown RBP3.06□□□□□ -1.92
CPSF3-205ENST00000489629 CHRNDQ07001 517 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 ADCK5Q3MIX3 580 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 C19orf48Q6RUI8 117 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 B3GNT6Q6ZMB0 384 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 CHERPQ8IWX8 916 aaKnown RBP3.06□□□□□ -1.92
CPSF3-205ENST00000489629 SAMD3Q8N6K7 520 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 USP38Q8NB14 1042 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 DUX3Q96PT4 197 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 FAM167BQ9BTA0 163 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 TAOK3Q9H2K8 898 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 MROH8Q9H579 483 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 NOD2Q9HC29 1040 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 ZNF334Q9HCZ1 680 aaPredicted RBP3.06□□□□□ -1.92
CPSF3-205ENST00000489629 DDX4Q9NQI0 724 aaKnown RBP3.06□□□□□ -1.92
CPSF3-205ENST00000489629 SMYD2Q9NRG4 433 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 CISD1Q9NZ45 108 aaKnown RBP3.06□□□□□ -1.92
CPSF3-205ENST00000489629 SUFUQ9UMX1 484 aa3.06□□□□□ -1.92
CPSF3-205ENST00000489629 PDS5AQ29RF7 1337 aaKnown RBP3.05□□□□□ -1.92
CPSF3-205ENST00000489629 A0A1W2PS18 150 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 ZG16O60844 167 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 SLC22A3O75751 556 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 SERPINB2P05120 415 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 PCNAP12004 261 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 SLC2A4P14672 509 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 CD53P19397 219 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 CDKN1AP38936 164 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 RELQ04864 619 aaPredicted RBP3.05□□□□□ -1.92
CPSF3-205ENST00000489629 RUNX2Q13950 521 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 EFR3AQ14156 821 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 NEDD9Q14511 834 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 PLA2G4FQ68DD2 849 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 ANKRD54Q6NXT1 300 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 WDR73Q6P4I2 378 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 CCNI2Q6ZMN8 369 aaPredicted RBP3.05□□□□□ -1.92
CPSF3-205ENST00000489629 DSG4Q86SJ6 1040 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 LSM14AQ8ND56 463 aaKnown RBP3.05□□□□□ -1.92
CPSF3-205ENST00000489629 OR13A1Q8NGR1 328 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 RND1Q92730 232 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 COG8Q96MW5 612 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 CD180Q99467 661 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 MXRA8Q9BRK3 442 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 HAUS8Q9BT25 410 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 PHF7Q9BWX1 381 aaPredicted RBP3.05□□□□□ -1.92
CPSF3-205ENST00000489629 CSTL1Q9H114 145 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 C17orf75Q9HAS0 396 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 PCDH9Q9HC56 1237 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 TINAGQ9UJW2 476 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 TCF19Q9Y242 345 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 PSAT1Q9Y617 370 aa3.05□□□□□ -1.92
CPSF3-205ENST00000489629 ASPDHA6ND91 283 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 KLK10O43240 276 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 MTA2O94776 668 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 LDLRP01130 860 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 APOHP02749 345 aaPredicted RBP3.04□□□□□ -1.92
CPSF3-205ENST00000489629 ATP1A1P05023 1023 aaKnown RBP3.04□□□□□ -1.92
CPSF3-205ENST00000489629 CETPP11597 493 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 FGF5P12034 268 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 CDH1P12830 882 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 CD58P19256 250 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 EDN2P20800 178 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 AGAP20933 346 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 VEGFCP49767 419 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 TBL3Q12788 808 aaKnown RBP3.04□□□□□ -1.92
CPSF3-205ENST00000489629 NAA25Q14CX7 972 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 BRD3Q15059 726 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 ANKRD1Q15327 319 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 TAF5Q15542 800 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 LRRC8EQ6NSJ5 796 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 GFRALQ6UXV0 394 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 MTSS1LQ765P7 747 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 NOXA1Q86UR1 476 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 FAM160B2Q86V87 743 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 TMEM219Q86XT9 240 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 KIAA2013Q8IYS2 634 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 WDSUB1Q8N9V3 476 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 AGBL3Q8NEM8 1001 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 FBXO17Q96EF6 278 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 ZC3HAV1LQ96H79 300 aaKnown RBP3.04□□□□□ -1.92
CPSF3-205ENST00000489629 KCNN2Q9H2S1 579 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 ESRP2Q9H6T0 727 aaKnown RBP3.04□□□□□ -1.92
CPSF3-205ENST00000489629 SCRT2Q9NQ03 307 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 TMEM30AQ9NV96 361 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 MCM9Q9NXL9 1143 aa3.04□□□□□ -1.92
CPSF3-205ENST00000489629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.04□□□□□ -1.92
CPSF3-205ENST00000489629 hCG_1642624A0A1W2PR95 340 aa3.03□□□□□ -1.92
CPSF3-205ENST00000489629 FAM72CH0Y354 149 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms