RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 KLF11O14901 512 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SHOXO15266 292 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 MSI1O43347 362 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SNX3O60493 162 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 AVILO75366 819 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 KRT37O76014 449 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 KRT38O76015 456 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 USP1O94782 785 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 BAIAP3O94812 1187 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 LATS1O95835 1130 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ESR1P03372 595 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 INHBAP08476 426 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SNRPAP09012 282 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 HMGA1P17096 107 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ATF6P18850 670 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TAC1P20366 129 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 GRIA1P42261 906 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ETV4P43268 484 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 PPP3CCP48454 512 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 CCT5P48643 541 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 MAPKAPK2P49137 400 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 NPY2RP49146 381 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 GPR15P49685 360 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 CSRP3P50461 194 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TBX4P57082 545 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 YBEYP58557 167 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 IL9RQ01113 521 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TAF10Q12962 218 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ZBTB17Q13105 803 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 HNRNPDQ14103 355 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SPARCL1Q14515 664 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 CRYMQ14894 314 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 EFTUD2Q15029 972 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 PDK4Q16654 411 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 PARP15Q460N3 678 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 LACTB2Q53H82 288 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 MS4A13Q5J8X5 152 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SPANXN3Q5MJ09 141 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 LGSNQ5TDP6 509 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 GKAP1Q5VSY0 366 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TIGD7Q6NT04 549 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 FBXO46Q6PJ61 603 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 MICALCLQ6ZW33 695 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 CBLL1Q75N03 491 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TAS1R1Q7RTX1 841 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 THAP5Q7Z6K1 395 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 C14orf80Q86SX3 495 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 LINC00523Q86TU6 105 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 PRPF39Q86UA1 669 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TAX1BP1Q86VP1 789 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SRRM1Q8IYB3 904 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 C7orf61Q8IZ16 206 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 TTC9BQ8N6N2 239 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ATP6V0D2Q8N8Y2 350 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 CCNYQ8ND76 341 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ADCY4Q8NFM4 1077 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 FBXO32Q969P5 355 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SCLYQ96I15 445 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 MCMBPQ9BTE3 642 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 MLPHQ9BV36 600 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 KIFC1Q9BW19 673 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SPATA9Q9BWV2 254 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ZYG11BQ9C0D3 744 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SLC39A8Q9C0K1 460 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 IL22Q9GZX6 179 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 VPS11Q9H270 941 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 NOL6Q9H6R4 1146 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 RXFP1Q9HBX9 757 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 PPANQ9NQ55 473 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SMYD2Q9NRG4 433 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 COX16Q9P0S2 106 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 KLHL8Q9P2G9 620 aaPredicted RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 STOML2Q9UJZ1 356 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 AAR2Q9Y312 384 aaKnown RBP5.63□□□□□ -1.51
ATG4A-208ENST00000489247 SNX10Q9Y5X0 201 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 FAM169AQ9Y6X4 670 aa5.63□□□□□ -1.51
ATG4A-208ENST00000489247 ZCWPW2A0A1B0GU75 182 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 A0A1W2PPM1 405 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 ZNF840PA6NDX5 716 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CXorf49A8MYA2 514 aaPredicted RBP5.62□□□□□ -1.51
ATG4A-208ENST00000489247 ADAM12O43184 909 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 TLR5O60602 858 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 RFPL1O75677 317 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 ANXA9O76027 345 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 C1RP00736 705 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 TIMP1P01033 207 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 MT-ND3P03897 115 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CLTBP09497 229 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CSH1P0DML2 217 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CSH2P0DML3 217 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CCNB1P14635 433 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 LAG3P18627 525 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 KRT15P19012 456 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 KRT4P19013 534 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CD247P20963 164 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 DNAJB1P25685 340 aa5.62□□□□□ -1.51
ATG4A-208ENST00000489247 CRHR1P34998 444 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms