RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 C18orf8Q96DM3 657 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 RAB6CQ9H0N0 254 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 PCDH12Q9NPG4 1184 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 SPATS2LQ9NUQ6 558 aaKnown RBP16.28■□□□□ 0.2
USP48-210ENST00000489108 TMEM248Q9NWD8 314 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 MOSPD1Q9UJG1 213 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 MAN1B1Q9UKM7 699 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
USP48-210ENST00000489108 RHPN2P1A8MT19 583 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 FAM72CH0Y354 149 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 RAD1O60671 282 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 RAMP2O60895 175 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 PIGNO95427 931 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 SCNN1AP37088 669 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 SUOXP51687 545 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 RHOAP61586 193 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 UGP2Q16851 508 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 FAM72AQ5TYM5 149 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 MANEALQ5VSG8 457 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 FAM72DQ6L9T8 149 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 FAM72BQ86X60 149 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 SLC45A3Q96JT2 553 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 KLC2Q9H0B6 622 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 CYP4F12Q9HCS2 524 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 SLC39A1Q9NY26 324 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 PLEKHB1Q9UF11 243 aaPredicted RBP16.27■□□□□ 0.2
USP48-210ENST00000489108 AJAP1Q9UKB5 411 aaPredicted RBP16.27■□□□□ 0.2
USP48-210ENST00000489108 CTNND2Q9UQB3 1225 aa16.27■□□□□ 0.2
USP48-210ENST00000489108 CACNA1DQ01668 2161 aa16.27■□□□□ 0.19
USP48-210ENST00000489108 BICDL2A1A5D9 508 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 CACNB4O00305 520 aaPredicted RBP16.26■□□□□ 0.19
USP48-210ENST00000489108 FOXN3O00409 490 aaPredicted RBP16.26■□□□□ 0.19
USP48-210ENST00000489108 PNMA6AP0CW24 399 aaPredicted RBP16.26■□□□□ 0.19
USP48-210ENST00000489108 BMP6P22004 513 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 MPSTP25325 297 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 ADRA1BP35368 520 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 PPP1R2P41236 205 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 CD97P48960 835 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 LIMK2P53671 638 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 KIAA1024LP59773 190 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 ATP11AP98196 1134 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 NKAIN2Q5VXU1 208 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 ZNF438Q7Z4V0 828 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 C17orf82Q86X59 251 aaPredicted RBP16.26■□□□□ 0.19
USP48-210ENST00000489108 TMEM35BQ8NCS4 154 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 AGBL5Q8NDL9 886 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 KIAA1524Q8TCG1 905 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 DDA1Q9BW61 102 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 OCIAD1Q9NX40 245 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
USP48-210ENST00000489108 ZSCAN5CA6NGD5 496 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 PRR19A6NJB7 356 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 TNFRSF10CO14798 259 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 CAPN5O15484 640 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 LRIG2O94898 1065 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 PRKCGP05129 697 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 FGF1P05230 155 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 CSTF2P33240 577 aaKnown RBP eCLIP16.25■□□□□ 0.19
USP48-210ENST00000489108 MLLT10P55197 1068 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 NRG1Q02297 640 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 TRA2AQ13595 282 aaKnown RBP eCLIP16.25■□□□□ 0.19
USP48-210ENST00000489108 NR1D2Q14995 579 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 CLPPQ16740 277 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 DEFB109BQ30KR1 87 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 LACTB2Q53H82 288 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 INO80DQ53TQ3 878 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 ATCAYQ86WG3 371 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 HCAR2Q8TDS4 363 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 ZDHHC1Q8WTX9 485 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 APOBEC4Q8WW27 367 aaKnown RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 EXOC2Q96KP1 924 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 NCAPGQ9BPX3 1015 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 LGR4Q9BXB1 951 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 ASPSCR1Q9BZE9 553 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 RETREG1Q9H6L5 497 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 NOL6Q9H6R4 1146 aaKnown RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 GPN2Q9H9Y4 310 aaPredicted RBP16.25■□□□□ 0.19
USP48-210ENST00000489108 PILRAQ9UKJ1 303 aa16.25■□□□□ 0.19
USP48-210ENST00000489108 LOC101059948A0A1B0GTJ6 334 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 TSPAN11A1L157 253 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 RECQL5O94762 991 aaPredicted RBP16.24■□□□□ 0.19
USP48-210ENST00000489108 ECEL1O95672 775 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 KELP23276 732 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 PON1P27169 355 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
USP48-210ENST00000489108 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
USP48-210ENST00000489108 CDC20Q12834 499 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 KLRB1Q12918 225 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 CYTH1Q15438 398 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 DCAF12Q5T6F0 453 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 ERAP2Q6P179 960 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 ZSWIM9Q86XI8 627 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 NRROSQ86YC3 692 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms