RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RP1P56715 2156 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 MTM1Q13496 603 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 NFATC4Q14934 902 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 RTP5Q14D33 572 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 HADHQ16836 314 aaKnown RBP23.12■■□□□ 1.29
COL9A3-213ENST00000489045 CDCP2Q5VXM1 449 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 GUSBP11Q6P575 273 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 LIPIQ6XZB0 460 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 PLA2G15Q8NCC3 412 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 FAM71BQ8TC56 605 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 TSACCQ96A04 125 aaPredicted RBP23.12■■□□□ 1.29
COL9A3-213ENST00000489045 NUDCD1Q96RS6 583 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 MGME1Q9BQP7 344 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 PACSIN1Q9BY11 444 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 CLPBQ9H078 707 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 SCUBE2Q9NQ36 999 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 CTTNBP2NLQ9P2B4 639 aa23.12■■□□□ 1.29
COL9A3-213ENST00000489045 CPED1A4D0V7 1026 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 A8MX80 341 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 LMO7DNF2Z398 122 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 RECQL5O94762 991 aaPredicted RBP23.11■■□□□ 1.29
COL9A3-213ENST00000489045 ANXA6P08133 673 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 CELA2BP08218 269 aaPredicted RBP23.11■■□□□ 1.29
COL9A3-213ENST00000489045 HTR1BP28222 390 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 BLKP51451 505 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 HK3P52790 923 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 MAXP61244 160 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 SLC18A3Q16572 532 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 ALG11Q2TAA5 492 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 COL28A1Q2UY09 1125 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 ATP13A4Q4VNC1 1196 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 SPECC1LQ69YQ0 1117 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 ENPP7Q6UWV6 458 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 NYAP1Q6ZVC0 841 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 HID1Q8IV36 788 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 BBS5Q8N3I7 341 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 MAPK15Q8TD08 544 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 PDCD6IPQ8WUM4 868 aaKnown RBP23.11■■□□□ 1.29
COL9A3-213ENST00000489045 NSMCE1Q8WV22 266 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 HNRNPLLQ8WVV9 542 aaKnown RBP23.11■■□□□ 1.29
COL9A3-213ENST00000489045 BOCQ9BWV1 1114 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 PCDHGC4Q9Y5F7 938 aa23.11■■□□□ 1.29
COL9A3-213ENST00000489045 CBFA2T2O43439 604 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 HTRA2O43464 458 aaPredicted RBP23.1■■□□□ 1.29
COL9A3-213ENST00000489045 MFSD11O43934 449 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 SOCS5O75159 536 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 GM2AP17900 193 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 MMP13P45452 471 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 ARSEP51690 589 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 TRIM14Q14142 442 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 DPYSL3Q14195 570 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 NR0B2Q15466 257 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 TCEA2Q15560 299 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 C6orf132Q5T0Z8 1188 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 EFL1Q7Z2Z2 1120 aaKnown RBP23.1■■□□□ 1.29
COL9A3-213ENST00000489045 SLC35F3Q8IY50 421 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 CTNNBL1Q8WYA6 563 aaPredicted RBP23.1■■□□□ 1.29
COL9A3-213ENST00000489045 WDR92Q96MX6 357 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 DNAJC7Q99615 494 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 ABCG4Q9H172 646 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 NOD2Q9HC29 1040 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 UVRAGQ9P2Y5 699 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 B4GALT6Q9UBX8 382 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 KLQ9UEF7 1012 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 PCDHB1Q9Y5F3 818 aa23.1■■□□□ 1.29
COL9A3-213ENST00000489045 YY2O15391 372 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 PROSCO94903 275 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 RASGRP1O95267 797 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 CPP00450 1065 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 MARC1Q5VT66 337 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 RD3Q7Z3Z2 195 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 FSTL5Q8N475 847 aaPredicted RBP23.09■■□□□ 1.29
COL9A3-213ENST00000489045 OR8K1Q8NGG5 319 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 SPOCK2Q92563 424 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 GLMNQ92990 594 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 DCBLD2Q96PD2 775 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 DEPDC7Q96QD5 511 aa23.09■■□□□ 1.29
COL9A3-213ENST00000489045 EME2A4GXA9 379 aaPredicted RBP23.08■■□□□ 1.29
COL9A3-213ENST00000489045 TLX3O43711 291 aaPredicted RBP23.08■■□□□ 1.29
COL9A3-213ENST00000489045 H2AFZP0C0S5 128 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 CTSEP14091 401 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 TGM2P21980 687 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 RPIAP49247 311 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 TAS2R40P59535 323 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 SRP54P61011 504 aaKnown RBP23.08■■□□□ 1.29
COL9A3-213ENST00000489045 TRAF2Q12933 501 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 ACOX1Q15067 660 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 ELOCQ15369 112 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 ASTE1Q2TB18 679 aaPredicted RBP23.08■■□□□ 1.29
COL9A3-213ENST00000489045 PERM1Q5SV97 790 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 KCTD16Q68DU8 428 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 NCBP2-AS2Q69YL0 99 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 H2AFVQ71UI9 128 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 ATL2Q8NHH9 583 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 PCDH19Q8TAB3 1148 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 PDXPQ96GD0 296 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 DEF6Q9H4E7 631 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 NT5MQ9NPB1 228 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 DOLKQ9UPQ8 538 aa23.08■■□□□ 1.29
COL9A3-213ENST00000489045 A0A087WV48 116 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms