RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CST8O60676 142 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 PGLSO95336 258 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 JCHAINP01591 159 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 TGM2P21980 687 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 HTR1BP28222 390 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 VIPR1P32241 457 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 IGFALSP35858 605 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 CDKN2BP42772 138 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 SEMG2Q02383 582 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 TRAF2Q12933 501 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 ARHGEF7Q14155 803 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 ACOX1Q15067 660 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 SHBQ15464 509 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 LIPIQ6XZB0 460 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 PARGQ86W56 976 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 TP53I13Q8NBR0 393 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-218ENST00000489037 ATL2Q8NHH9 583 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 EXD1Q8NHP7 514 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 BTN2A2Q8WVV5 523 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 P3H4Q92791 437 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
BRCA1-218ENST00000489037 CCDC66A2RUB6 948 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 RCCD1A6NED2 376 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 GOLGA8CPA6NN73 597 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 A8MX80 341 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 KCNK1O00180 336 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 SDC3O75056 442 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 HLA-DQB2P05538 268 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 FTH1P19P0C7X4 201 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 ALPPL2P10696 532 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 PEX5P50542 639 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 PFN3P60673 137 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 COPS2P61201 443 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 IFI35P80217 286 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-218ENST00000489037 DSC2Q02487 901 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 AGERQ15109 404 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 IRF4Q15306 451 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 CCDC181Q5TID7 509 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 ALG1LQ6GMV1 187 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 NPNTQ6UXI9 565 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 SYCE1Q8N0S2 351 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 SLC22A18ASQ8N1D0 253 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 BAHD1Q8TBE0 780 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-218ENST00000489037 LRRN4Q8WUT4 740 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 SCRN2Q96FV2 425 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 CNDP2Q96KP4 475 aaKnown RBP14.34□□□□□ -0.11
BRCA1-218ENST00000489037 FERMT1Q9BQL6 677 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 MBNL1Q9NR56 388 aaKnown RBP14.34□□□□□ -0.11
BRCA1-218ENST00000489037 B4GALT6Q9UBX8 382 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 DNPEPQ9ULA0 475 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 REXO2Q9Y3B8 237 aaKnown RBP14.34□□□□□ -0.11
BRCA1-218ENST00000489037 PCDHA3Q9Y5H8 950 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 DUSP10Q9Y6W6 482 aa14.34□□□□□ -0.11
BRCA1-218ENST00000489037 COL5A1P20908 1838 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-218ENST00000489037 KNTC1P50748 2209 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 ENC1O14682 589 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 MTSS1O43312 755 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 NRDCO43847 1150 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 PIAS2O75928 621 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 RECQL5O94762 991 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-218ENST00000489037 CSF2P04141 144 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 PCCBP05166 539 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 JUNDP17535 347 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 DGKAP23743 735 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 CTNNA1P35221 906 aaKnown RBP14.33□□□□□ -0.12
BRCA1-218ENST00000489037 RWDD2BP57060 319 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 SHC2P98077 582 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 RALGDSQ12967 914 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 MTM1Q13496 603 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 FZD2Q14332 565 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 LLGL1Q15334 1064 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 PPP2R5EQ16537 467 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 TAZQ16635 292 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 WSCD2Q2TBF2 565 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 DENND2CQ68D51 928 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 TMEM139Q8IV31 216 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 TFB1MQ8WVM0 346 aaKnown RBP14.33□□□□□ -0.12
BRCA1-218ENST00000489037 NSMCE3Q96MG7 304 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 IL12RB2Q99665 862 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 LACRTQ9GZZ8 138 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 GPR27Q9NS67 375 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 EVA1BQ9NVM1 165 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 SALL4Q9UJQ4 1053 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 AMFRQ9UKV5 643 aa14.33□□□□□ -0.12
BRCA1-218ENST00000489037 TPRP12270 2363 aaKnown RBP14.33□□□□□ -0.12
BRCA1-218ENST00000489037 hCG_1818297A0A087WSY0 165 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 MACROD2A1Z1Q3 448 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PSMD11O00231 422 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 CACNB4O00305 520 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PTMAP06454 111 aaKnown RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 ATXN1LP0C7T5 689 aaKnown RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 NME1P15531 152 aaKnown RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 CTPS1P17812 591 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 KELP23276 732 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 CTNNA2P26232 953 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 BLKP51451 505 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 RPL26P61254 145 aaKnown RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PPARDQ03181 441 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms