RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 TMOD4Q9NZQ9 345 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 TRIM10Q9UDY6 481 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 VPS51Q9UID3 782 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 CNOT7Q9UIV1 285 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 HACL1Q9UJ83 578 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 BTBD3Q9Y2F9 522 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 RPS6KL1Q9Y6S9 549 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MYH7BA7E2Y1 1941 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 IGLV3-22A0A075B6J6 115 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 A0A087WZ62 844 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 DYTNA2CJ06 578 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 AQP7P3A6NL99 342 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RHPN2P1A8MT19 583 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RSPH10B2B2RC85 870 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RASA4BC9J798 803 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 M0R3H8 397 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 IPO5O00410 1097 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 PDXKO00764 312 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 EIF3DO15371 548 aaKnown RBP eCLIP3.02□□□□□ -1.93
CALD1-221ENST00000489019 RASA4O43374 803 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 NCK2O43639 380 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 BUB1O43683 1085 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 PSMD10O75832 226 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 SLITRK3O94933 977 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 SEC31AO94979 1220 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 MOCS3O95396 460 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 MT-CO3P00414 261 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 NR3C1P04150 777 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 ATP1A1P05023 1023 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 PLEKP08567 350 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 CHRM5P08912 532 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 RHOXF2BP0C7M4 288 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RSPH10BP0C881 870 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 CREB1P16220 341 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 ATF7P17544 494 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 ABCB4P21439 1286 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TNFSF4P23510 183 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 MCM3P25205 808 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 CCND2P30279 289 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 PSMC2P35998 433 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 ARHGAP25P42331 645 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TNNT3P45378 269 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 MAPK9P45984 424 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 GMPSP49915 693 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 CASP5P51878 434 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 GEMIN4P57678 1058 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 KRTAP10-11P60412 298 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 GFPT1Q06210 699 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 CETN1Q12798 172 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 PPP2R5CQ13362 524 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 PRKG1Q13976 671 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 SIM2Q14190 667 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 DAZAP2Q15038 168 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 ETFDHQ16134 617 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 FAM187BQ17R55 369 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 EXOC3L4Q17RC7 722 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 MANEALQ5VSG8 457 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 C11orf87Q6NUJ2 197 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 WDR59Q6PJI9 974 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 GBP6Q6ZN66 633 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 VPS36Q86VN1 386 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 GLCCI1Q86VQ1 547 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 APOBEC3FQ8IUX4 373 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 SCYL3Q8IZE3 742 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 KRT78Q8N1N4 520 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 GALNT16Q8N428 558 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 OR2C3Q8N628 320 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 C11orf44Q8N8P7 122 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 FAM133AQ8N9E0 248 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TRIM58Q8NG06 486 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 SMG7Q92540 1137 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 LPAR1Q92633 364 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TAF4BQ92750 862 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RPGRIP1Q96KN7 1286 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TAAR1Q96RJ0 339 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RIT2Q99578 217 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 RHOXF2Q9BQY4 288 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 LXNQ9BS40 222 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 CRACR2AQ9BSW2 395 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 PARD6BQ9BYG5 372 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 EDEM3Q9BZQ6 932 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 WDR12Q9GZL7 423 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 BTBD1Q9H0C5 482 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 UNC45AQ9H3U1 944 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TMEM206Q9H813 350 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 CERS4Q9HA82 394 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 PARVGQ9HBI0 331 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TBC1D22BQ9NU19 505 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TBC1D23Q9NUY8 699 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 SEPT11Q9NVA2 429 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 KCND2Q9NZV8 630 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 LARSQ9P2J5 1176 aaKnown RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 KLHL13Q9P2N7 655 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 MGAT4CQ9UBM8 478 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 SEL1LQ9UBV2 794 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 ZNF212Q9UDV6 495 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 ARMCX3Q9UH62 379 aaPredicted RBP3.02□□□□□ -1.93
CALD1-221ENST00000489019 ODF2LQ9ULJ1 636 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TFR2Q9UP52 801 aa3.02□□□□□ -1.93
CALD1-221ENST00000489019 TRAF3IP3Q9Y228 551 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms