RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ABCB8Q9NUT2 735 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 ANKRD36A6QL64 1941 aa12.8□□□□□ -0.36
NELFE-209ENST00000488426 KANSL1LA0AUZ9 987 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 ARNTLO00327 626 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 TM9SF1O15321 606 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 PSMC3P17980 439 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 TARSP26639 723 aaKnown RBP12.79□□□□□ -0.36
NELFE-209ENST00000488426 CD70P32970 193 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 CCNFP41002 786 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 MAPK8P45983 427 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 AP1S1P61966 158 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 DMC1Q14565 340 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 HSP90AA5PQ58FG0 334 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 PITRM1Q5JRX3 1037 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 TSTD2Q5T7W7 516 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 SH2D5Q6ZV89 423 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 MFSD6LQ8IWD5 586 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 CNTN4Q8IWV2 1026 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 GABPB2Q8TAK5 448 aaPredicted RBP12.79□□□□□ -0.36
NELFE-209ENST00000488426 ACMSDQ8TDX5 336 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 DENND1AQ8TEH3 1009 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 DYDC1Q8WWB3 177 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 APOPT1Q96IL0 206 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 EXOC2Q96KP1 924 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
NELFE-209ENST00000488426 SLC2A11Q9BYW1 496 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 BRD9Q9H8M2 597 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 MKS1Q9NXB0 559 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 RIMKLBQ9ULI2 386 aa12.79□□□□□ -0.36
NELFE-209ENST00000488426 EP300Q09472 2414 aaPredicted RBP12.79□□□□□ -0.36
NELFE-209ENST00000488426 HMX2A2RU54 273 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 MROH6A6NGR9 719 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 FAM170BA6NMN3 283 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 NEDD8-MDP1E9PL57 170 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 SIN3BO75182 1162 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 SPAG7O75391 227 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 SPRP35270 261 aaPredicted RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 SOX9P48436 509 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ARCN1P48444 511 aaKnown RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 CSNK1DP48730 415 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 UBXN2BQ14CS0 331 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ANGPT1Q15389 498 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ESRP1Q6NXG1 681 aaKnown RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 NCEH1Q6PIU2 408 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 MAML2Q8IZL2 1156 aaPredicted RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 RBBP8Q99708 897 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 FAM167BQ9BTA0 163 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ADGRE3Q9BY15 652 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 IL1RAPL1Q9NZN1 696 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 INTS6Q9UL03 887 aaKnown RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 PSAT1Q9Y617 370 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 TIMM44O43615 452 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 RFPL1O75677 317 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 VAPBO95292 243 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ITGA2BP08514 1039 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 PYGBP11216 843 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 TYRP14679 529 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ARNTP27540 789 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 HLA-FP30511 346 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 LIMK2P53671 638 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 PPARDQ03181 441 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 CNGA3Q16281 694 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 UGP2Q16851 508 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 LY6G5CQ5SRR4 150 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 MROH9Q5TGP6 573 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 SRLQ86TD4 932 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 ADGRG2Q8IZP9 1017 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 MGARPQ8TDB4 240 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 BRSK1Q8TDC3 778 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 PRRX2Q99811 253 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 FCF1Q9Y324 198 aaKnown RBP12.78□□□□□ -0.36
NELFE-209ENST00000488426 RAI2Q9Y5P3 530 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 WNT6Q9Y6F9 365 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 GPR179Q6PRD1 2367 aa12.78□□□□□ -0.36
NELFE-209ENST00000488426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.77□□□□□ -0.37
NELFE-209ENST00000488426 GOLGA8RI6L899 631 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 LDB2O43679 373 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 MT-CO1P00395 513 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 PABPC1P11940 636 aaKnown RBP12.77□□□□□ -0.37
NELFE-209ENST00000488426 RPA3P35244 121 aaPredicted RBP12.77□□□□□ -0.37
NELFE-209ENST00000488426 HADHAP40939 763 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 NEK3P51956 506 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 IL9RQ01113 521 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 ACVR1Q04771 509 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 SULT2A1Q06520 285 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 FCHO2Q0JRZ9 810 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 GALNT3Q14435 633 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms