RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 KYAT3Q6YP21 454 aaKnown RBP16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 KDM7AQ6ZMT4 941 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 SPATS2Q86XZ4 545 aaKnown RBP16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 ACTL9Q8TC94 416 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 PIH1D2Q8WWB5 315 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 SKA1Q96BD8 255 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 LENG8Q96PV6 779 aaPredicted RBP16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 MCCC1Q96RQ3 725 aaPredicted RBP16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 GPR27Q9NS67 375 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 COQ6Q9Y2Z9 468 aa16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 CNOT1A5YKK6 2376 aaKnown RBP16.09■□□□□ 0.17
ERGIC3-216ENST00000488384 POM121BA6NF01 834 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 A6NNZ2 444 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 HACD1B0YJ81 288 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 ZNF883P0CG24 379 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 THEGLP0DJG4 465 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 CD59P13987 128 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 GM2AP17900 193 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 IGFALSP35858 605 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 CETN2P41208 172 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 CD86P42081 329 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 XRCC4Q13426 336 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 TEX44Q53QW1 395 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 SLC22A18ASQ8N1D0 253 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 TP53I13Q8NBR0 393 aaPredicted RBP16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 OR13H1Q8NG92 308 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 CENPTQ96BT3 561 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 BMFQ96LC9 184 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 SMIM14Q96QK8 99 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 FAM118BQ9BPY3 351 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 GDF3Q9NR23 364 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 PHTF1Q9UMS5 762 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 HS3ST3A1Q9Y663 406 aa16.08■□□□□ 0.16
ERGIC3-216ENST00000488384 KMT2BQ9UMN6 2715 aaPredicted RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 A0A1B0GTQ1 180 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 CFAP69A5D8W1 941 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 NPIPB15A6NHN6 443 aaPredicted RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 MTSS1O43312 755 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 TJP3O95049 919 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 PRLP01236 227 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 ELFN1P0C7U0 828 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 LHCGRP22888 699 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 VIPR1P32241 457 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 CCT8P50990 548 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 SLC14A1Q13336 389 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 KLF1Q13351 362 aaPredicted RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 AGERQ15109 404 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 PTPRRQ15256 657 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 IRF4Q15306 451 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 CNGA3Q16281 694 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 PRAMEF14Q5SWL7 426 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 MEI1Q5TIA1 1274 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 LIPIQ6XZB0 460 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 PTAR1Q7Z6K3 402 aaPredicted RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 HTR3CQ8WXA8 447 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 TADA1Q96BN2 335 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 IMP4Q96G21 291 aaKnown RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 KLHDC7BQ96G42 594 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 TEKT5Q96M29 485 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 ALS2CR12Q96Q35 445 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 ELF4Q99607 663 aaPredicted RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 SLC25A51Q9H1U9 297 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 C10orf88Q9H8K7 445 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 MBNL1Q9NR56 388 aaKnown RBP16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 TM7SF3Q9NS93 570 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 CHKBQ9Y259 395 aa16.07■□□□□ 0.16
ERGIC3-216ENST00000488384 A0A0J9YYE9 177 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 A8MX80 341 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 FPGTO14772 594 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 MAGEC1O60732 1142 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 HEXIM1O94992 359 aaKnown RBP16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 TRBC1P01850 177 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 ADRB1P08588 477 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 ALPIP09923 528 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 CTPS1P17812 591 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 CA4P22748 312 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 CD68P34810 354 aaPredicted RBP16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 PFN3P60673 137 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 IL9RQ01113 521 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 SHBQ15464 509 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 SLC14A2Q15849 920 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 WSCD2Q2TBF2 565 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 PPM1JQ5JR12 505 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 TPRG1LQ5T0D9 272 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 Q6ZSR6 202 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 USP45Q70EL2 814 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 PIP4P1Q86T03 277 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 TSPAN33Q86UF1 283 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 CDKL3Q8IVW4 592 aaPredicted RBP16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 ZNF567Q8N184 647 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 FAM174AQ8TBP5 190 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 ANP32BQ92688 251 aaKnown RBP16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 SCRN2Q96FV2 425 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 RBM15Q96T37 977 aaKnown RBP eCLIP16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 C1QTNF7Q9BXJ2 289 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 ERVMER34-1Q9H9K5 563 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 GLOD4Q9HC38 313 aa16.06■□□□□ 0.16
ERGIC3-216ENST00000488384 PCDH9Q9HC56 1237 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms