RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 BIRC7Q96CA5 298 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 RMDN1Q96DB5 314 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 LOXL4Q96JB6 756 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 SRPK1Q96SB4 655 aaKnown RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 GGT7Q9UJ14 662 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 ZFR2Q9UPR6 939 aaKnown RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 ITM2BQ9Y287 266 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 MRFAP1Q9Y605 127 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 A0A1W2PQU0 124 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 ESPNB1AK53 854 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 ECEL1O95672 775 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 PRKCGP05129 697 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 IGHV4-34P06331 123 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 ATXN1LP0C7T5 689 aaKnown RBP19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 VIPR1P32241 457 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 HNF1BP35680 557 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 PTGIRP43119 386 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 FAM193AP78312 1265 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 GALNT3Q14435 633 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 SLC1A5Q15758 541 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 FAXCQ5TGI0 409 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 SYDE1Q6ZW31 735 aaPredicted RBP19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 CBARPQ8N350 705 aaPredicted RBP19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 CXorf40AQ8TE69 158 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 FSD1LQ9BXM9 530 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 LRRC40Q9H9A6 602 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 ARNT2Q9HBZ2 717 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 MAGEE1Q9HCI5 957 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 RAB6BQ9NRW1 208 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 B4GALT6Q9UBX8 382 aa19.45■□□□□ 0.7
PCOLCE-208ENST00000487172 SPAG17Q6Q759 2223 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 PRR23AA6NEV1 266 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 CAPN8A6NHC0 703 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 PSMD11O00231 422 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 TM7SF2O76062 418 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 SUN1O94901 812 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 FSBPO95073 299 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 AGTP01019 485 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 FGF1P05230 155 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 ALPIP09923 528 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 ZNF30P17039 623 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 CTPS1P17812 591 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 PTGER3P43115 390 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 PPP2CBP62714 309 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 PPP2CAP67775 309 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 DHX34Q14147 1143 aaKnown RBP19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 AGERQ15109 404 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 ZNF284Q2VY69 593 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 SIRPB2Q5JXA9 342 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 WDR45BQ5MNZ6 344 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 SYCP2LQ5T4T6 812 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 LIPIQ6XZB0 460 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 KDELC2Q7Z4H8 507 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 KLHL7Q8IXQ5 586 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 RAVER1Q8IY67 606 aaKnown RBP19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 DEFB119Q8N690 84 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 PDCD7Q8N8D1 485 aaKnown RBP19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 SUMF1Q8NBK3 374 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 CCHCR1Q8TD31 782 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 HSPA12BQ96MM6 686 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 ORAI3Q9BRQ5 295 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 FICDQ9BVA6 458 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 C1QTNF2Q9BXJ5 285 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 RAB23Q9ULC3 237 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 DMTF1Q9Y222 760 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 TRPM6Q9BX84 2022 aa19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 TNRC6BQ9UPQ9 1833 aaKnown RBP19.44■□□□□ 0.7
PCOLCE-208ENST00000487172 A0A1W2PPC4 97 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 NPIPB15A6NHN6 443 aaPredicted RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 PROB1E7EW31 1015 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 MMP20O60882 483 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 HEXIM1O94992 359 aaKnown RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 DPP6P42658 865 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 DHPSP49366 369 aaPredicted RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 LIG3P49916 1009 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 CREB5Q02930 508 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 TRIP13Q15645 432 aaPredicted RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 CDKN3Q16667 212 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 SETMARQ53H47 684 aaPredicted RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 LYSMD4Q5XG99 296 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 NAPEPLDQ6IQ20 393 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 LINC00523Q86TU6 105 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 TBL1YQ9BQ87 522 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 SLC17A9Q9BYT1 436 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 EIF2B3Q9NR50 452 aaKnown RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 FAM86C1Q9NVL1 165 aa19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 SMG5Q9UPR3 1016 aaKnown RBP19.43■□□□□ 0.7
PCOLCE-208ENST00000487172 CACNA1HO95180 2353 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 IGLON5A6NGN9 336 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 MEI4A8MW99 385 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 LHCGRP22888 699 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 CD27P26842 260 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 MAGEA6P43360 314 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 CHRNA4P43681 627 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 GPS1Q13098 491 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 PTK6Q13882 451 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 ARHGEF7Q14155 803 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 PPP1R7Q15435 360 aa19.42■□□□□ 0.7
PCOLCE-208ENST00000487172 CNGA3Q16281 694 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms