RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 DEFA1P59665 94 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 DEFA3P59666 94 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 MSLNQ13421 630 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-228ENST00000486227 PHKG1Q16816 387 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 PPP2R2DQ66LE6 453 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 ISLR2Q6UXK2 745 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 USP45Q70EL2 814 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 METTL3Q86U44 580 aaKnown RBP11.07□□□□□ -0.64
HDAC6-228ENST00000486227 SAPCD2Q86UD0 394 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 STAG3L4Q8TBR4 150 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 TRPC4APQ8TEL6 797 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 HGH1Q9BTY7 390 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 RHOJQ9H4E5 214 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 WDR41Q9HAD4 459 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 VPS45Q9NRW7 570 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 ZNF510Q9Y2H8 683 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 NAV1Q8NEY1 1877 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 A0A0U1RQF3 1178 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 KANSL1LA0AUZ9 987 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 SYN3O14994 580 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 KRT6AP02538 564 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 KRT6BP04259 564 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 FGF1P05230 155 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 KCNE1P15382 129 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 GABRB2P47870 512 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 KRT6CP48668 564 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
HDAC6-228ENST00000486227 POM121L1PQ3SYA9 428 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 FAM45BPQ6NSW5 357 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 PRSS55Q6UWB4 352 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-228ENST00000486227 RINLQ6ZS11 566 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 HFE2Q6ZVN8 426 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 CCDC80Q76M96 950 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 OSTM1Q86WC4 334 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 STK40Q8N2I9 435 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 FAM45AQ8TCE6 357 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 PAWRQ96IZ0 340 aaKnown RBP11.07□□□□□ -0.64
HDAC6-228ENST00000486227 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 FAM32AQ9Y421 112 aaKnown RBP11.07□□□□□ -0.64
HDAC6-228ENST00000486227 DYRK1BQ9Y463 629 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 TLL2Q9Y6L7 1015 aa11.07□□□□□ -0.64
HDAC6-228ENST00000486227 BIRC5O15392 142 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 SLC10A3P09131 477 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 OR56A5P0C7T3 313 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 FCGR1AP12314 374 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 HLA-DPA1P20036 260 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 LPOP22079 712 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PTPN3P26045 913 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 CORO1AP31146 461 aaKnown RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 ILF2Q12905 390 aaKnown RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 SETMARQ53H47 684 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 RHBDF2Q6PJF5 856 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 MILR1Q7Z6M3 343 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 CIR1Q86X95 450 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 HOMEZQ8IX15 550 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PQLC1Q8N2U9 271 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 BTBD9Q96Q07 612 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 STRA6Q9BX79 667 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 GBA3Q9H227 469 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PIGVQ9NUD9 493 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 TAS2R1Q9NYW7 299 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 COPG2Q9UBF2 871 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 AKAP11Q9UKA4 1901 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 KCNU1A8MYU2 1149 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PRR5-ARHGAP8B1AHC4 643 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 TBX10O75333 385 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 CLDN11O75508 207 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 STAU1O95793 577 aaKnown RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 TACR2P21452 398 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 S100A5P33763 92 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 WNT7BP56706 349 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 ARHGAP8P85298 464 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 DSC2Q02487 901 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 HSPA14Q0VDF9 509 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PPM1JQ5JR12 505 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 MFSD4BQ5TF39 518 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 OLFML1Q6UWY5 402 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 ENDOVQ8N8Q3 282 aaKnown RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 DRAXINQ8NBI3 349 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PPP1R14BQ96C90 147 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 MARK4Q96L34 752 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 SELENONQ9NZV5 590 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 DNAJB4Q9UDY4 337 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 DAPK2Q9UIK4 370 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 VWA7Q9Y334 891 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 PLLPQ9Y342 182 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 WASF2Q9Y6W5 498 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 GOLGA4Q13439 2230 aaKnown RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 IGKV6D-21A0A0A0MT36 114 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 MRASO14807 208 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 BPGMP07738 259 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 CTSEP14091 401 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 ALOX15P16050 662 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 CCNCP24863 283 aa11.06□□□□□ -0.64
HDAC6-228ENST00000486227 CCND3P30281 292 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-228ENST00000486227 GALK1P51570 392 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms