RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FAM131CQ96AQ9 280 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 OXNAD1Q96HP4 312 aaPredicted RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 NSMCE3Q96MG7 304 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 HSPA12BQ96MM6 686 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 SRPK1Q96SB4 655 aaKnown RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 TBL1YQ9BQ87 522 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 WRAP53Q9BUR4 548 aaKnown RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 MLPHQ9BV36 600 aaPredicted RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 C6orf106Q9H6K1 298 aaPredicted RBP11.45□□□□□ -0.58
NUP50-216ENST00000486184 LRRC40Q9H9A6 602 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 RAB6BQ9NRW1 208 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ASIC3Q9UHC3 531 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 ITM2BQ9Y287 266 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 FADS3Q9Y5Q0 445 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 DOCK9Q9BZ29 2069 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 MYLKQ15746 1914 aa11.45□□□□□ -0.58
NUP50-216ENST00000486184 A0A0J9YYE9 177 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 A0A1W2PQU0 124 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 CAPN8A6NHC0 703 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 ANKRD66B4E2M5 251 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 FZD6O60353 706 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 EPOP01588 193 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 TRBC1P01850 177 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 FGF1P05230 155 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 ALPIP09923 528 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 ZSCAN5DPP0CG00 497 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 MAT2AP31153 395 aaKnown RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 VIPR1P32241 457 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 RPL22P35268 128 aaKnown RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 MMP12P39900 470 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 DPP6P42658 865 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 CCR5P51681 352 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 TAS2R38P59533 333 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 C2orf54Q08AI8 447 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 GPS1Q13098 491 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SGCGQ13326 291 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 DHX34Q14147 1143 aaKnown RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 LPAL2Q16609 132 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 PLK5Q496M5 336 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SETMARQ53H47 684 aaPredicted RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 KDELC1Q6UW63 502 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SYDE1Q6ZW31 735 aaPredicted RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 DPPA4Q7L190 304 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 PRUNE1Q86TP1 453 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 LINC00523Q86TU6 105 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 TRIM69Q86WT6 500 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 HORMAD1Q86X24 394 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 GLIS1Q8NBF1 620 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SPATA4Q8NEY3 305 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 VOPP1Q96AW1 172 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 TADA1Q96BN2 335 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 ZC3H10Q96K80 434 aaKnown RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 MRGPRX2Q96LB1 330 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 KRT12Q99456 494 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 C1QTNF7Q9BXJ2 289 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 DUSP15Q9H1R2 295 aaPredicted RBP11.44□□□□□ -0.58
NUP50-216ENST00000486184 EPC1Q9H2F5 836 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SEMA4AQ9H3S1 761 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 ETNK1Q9HBU6 452 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 FAM86C1Q9NVL1 165 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 B4GALT6Q9UBX8 382 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 PCYOX1Q9UHG3 505 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 GGT7Q9UJ14 662 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 MRFAP1Q9Y605 127 aa11.44□□□□□ -0.58
NUP50-216ENST00000486184 SCN8AQ9UQD0 1980 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 METTL12A8MUP2 240 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 A8MX80 341 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 AREL1O15033 823 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 LZTS3O60299 673 aaPredicted RBP11.43□□□□□ -0.58
NUP50-216ENST00000486184 ZNF500O60304 480 aaPredicted RBP11.43□□□□□ -0.58
NUP50-216ENST00000486184 MMP20O60882 483 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 TM7SF2O76062 418 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 AP2A1O95782 977 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 AGTP01019 485 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 APRTP07741 180 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 ZNF30P17039 623 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 ITIH2P19823 946 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 HNF1BP35680 557 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 NUDT1P36639 197 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 ADCY8P40145 1251 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 TERF1P54274 439 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 PPP2CBP62714 309 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 PPP2CAP67775 309 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 SARNPP82979 210 aaKnown RBP11.43□□□□□ -0.58
NUP50-216ENST00000486184 SEMG2Q02383 582 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 IHHQ14623 411 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 SLC1A5Q15758 541 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 QPCTQ16769 361 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 TMEM52BQ4KMG9 183 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 SIRPB2Q5JXA9 342 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 DENND2CQ68D51 928 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 CYP2U1Q7Z449 544 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 MAATS1Q7Z4T9 603 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 DNAAF3Q8N9W5 541 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 SLCO2A1Q92959 643 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 BIRC7Q96CA5 298 aa11.43□□□□□ -0.58
NUP50-216ENST00000486184 MCCC1Q96RQ3 725 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms